RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 LRRC56Q8IYG6 542 aaPredicted RBP6.41□□□□□ -1.38
NEDD9-216ENST00000620854 SPAG16Q8N0X2 631 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 ACOT4Q8N9L9 421 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 OR52E2Q8NGJ4 325 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 ZDHHC1Q8WTX9 485 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 NXPE3Q969Y0 559 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 DMRTA2Q96SC8 542 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 DPYSL5Q9BPU6 564 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 MICU1Q9BPX6 476 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 PINK1Q9BXM7 581 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.41□□□□□ -1.38
NEDD9-216ENST00000620854 MYEF2Q9P2K5 600 aaKnown RBP6.41□□□□□ -1.38
NEDD9-216ENST00000620854 LAMP5Q9UJQ1 280 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 PLXNB3Q9ULL4 1909 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 A0A0G2JK05 382 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 C4orf51C9J302 202 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 G3V3Q6 166 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 SOX1O00570 391 aaPredicted RBP6.41□□□□□ -1.38
NEDD9-216ENST00000620854 EGFP01133 1207 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 IGHA1P01876 353 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 MAS1P04201 325 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 CBX5P45973 191 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 TPMTP51580 245 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 RPS15P62841 145 aaKnown RBP6.41□□□□□ -1.38
NEDD9-216ENST00000620854 FOXK2Q01167 660 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 KCNAB1Q14722 419 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 PRRT3Q5FWE3 981 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 SLC6A19Q695T7 634 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 PARM1Q6UWI2 310 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 LRRN1Q6UXK5 716 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 WDR88Q6ZMY6 472 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 DPPA4Q7L190 304 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF761Q86XN6 746 aaPredicted RBP6.41□□□□□ -1.38
NEDD9-216ENST00000620854 AVL9Q8NBF6 648 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 THAP6Q8TBB0 222 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 HAVCR1Q96D42 359 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 SLC35A4Q96G79 324 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 DGAT2Q96PD7 388 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 NOX4Q9NPH5 578 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 CD93Q9NPY3 652 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 TAS2R3Q9NYW6 316 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 PCDHGA5Q9Y5G8 931 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 UNC119BA6NIH7 251 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF878C9JN71 531 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF217O75362 1048 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 RBBP9O75884 186 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 AIFM1O95831 613 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 AGR2O95994 175 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 CSTAP01040 98 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 NMBP08949 121 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 SPARCP09486 303 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 SBK2P0C263 348 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 PTBP1P26599 531 aaKnown RBP eCLIP6.41□□□□□ -1.387e-8■■■□□ 15.6
NEDD9-216ENST00000620854 GDI2P50395 445 aaKnown RBP6.41□□□□□ -1.38
NEDD9-216ENST00000620854 ERVK-25P63136 954 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 MRPS21P82921 87 aaKnown RBP6.41□□□□□ -1.38
NEDD9-216ENST00000620854 RIN1Q13671 783 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 C2orf68Q2NKX9 166 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 PUS10Q3MIT2 529 aaKnown RBP6.41□□□□□ -1.38
NEDD9-216ENST00000620854 SLC22A10Q63ZE4 541 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 ABHD13Q7L211 337 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 DVL3Q92997 716 aaPredicted RBP6.41□□□□□ -1.38
NEDD9-216ENST00000620854 TMEM41AQ96HV5 264 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 TNFRSF13CQ96RJ3 184 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 UBL7Q96S82 380 aaPredicted RBP6.41□□□□□ -1.38
NEDD9-216ENST00000620854 HRASLS2Q9NWW9 162 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 COPS7AQ9UBW8 275 aa6.41□□□□□ -1.38
NEDD9-216ENST00000620854 LRIT2A6NDA9 550 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 F5H0A9 414 aaPredicted RBP6.4□□□□□ -1.38
NEDD9-216ENST00000620854 PEX12O00623 359 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 LAMTOR5O43504 91 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 TMIGD3P0DMS9 266 aaPredicted RBP6.4□□□□□ -1.38
NEDD9-216ENST00000620854 LIPCP11150 499 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 APEHP13798 732 aaKnown RBP6.4□□□□□ -1.38
NEDD9-216ENST00000620854 IL9P15248 144 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 FPR3P25089 353 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 RPS27P42677 84 aaKnown RBP6.4□□□□□ -1.38
NEDD9-216ENST00000620854 TDGQ13569 410 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF273Q14593 569 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 MAPK14Q16539 360 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 STPG1Q5TH74 334 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 FBXO42Q6P3S6 717 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 FAM111BQ6SJ93 734 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 NDUFAF7Q7L592 441 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 SFTPA1Q8IWL2 248 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 LMX1AQ8TE12 382 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 CCDC107Q8WV48 283 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 DTD2Q96FN9 168 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 TMEM185BQ9H7F4 350 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 EXOGQ9Y2C4 368 aaKnown RBP6.4□□□□□ -1.38
NEDD9-216ENST00000620854 YBX2Q9Y2T7 364 aaKnown RBP6.4□□□□□ -1.38
NEDD9-216ENST00000620854 MDC1Q14676 2089 aaKnown RBP6.4□□□□□ -1.38
NEDD9-216ENST00000620854 FAM74A7A6NL05 159 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 SCDO00767 359 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 EMC8O43402 210 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 CREBL2O60519 120 aaPredicted RBP6.4□□□□□ -1.38
NEDD9-216ENST00000620854 ZNF35P13682 527 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 ACHEP22303 614 aa6.4□□□□□ -1.38
NEDD9-216ENST00000620854 HNRNPA2B1P22626 353 aaKnown RBP6.4□□□□□ -1.38
NEDD9-216ENST00000620854 CTHP32929 405 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms