RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 TSPAN10Q9H1Z9 355 aaPredicted RBP17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 DNAJB12Q9NXW2 375 aaKnown RBP17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 THAP10Q9P2Z0 257 aaPredicted RBP17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 PFDN2Q9UHV9 154 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 GABRA1P14867 456 aa17.92■□□□□ 0.46
PDLIM3-212ENST00000620787 PPP3CBP16298 524 aa17.92■□□□□ 0.46
PDLIM3-212ENST00000620787 ART1P52961 327 aa17.92■□□□□ 0.46
PDLIM3-212ENST00000620787 H2BFSP57053 126 aa17.92■□□□□ 0.46
PDLIM3-212ENST00000620787 PRICKLE4Q2TBC4 344 aa17.92■□□□□ 0.46
PDLIM3-212ENST00000620787 ZC3H14Q6PJT7 736 aaKnown RBP17.92■□□□□ 0.46
PDLIM3-212ENST00000620787 STAC2Q6ZMT1 411 aa17.92■□□□□ 0.46
PDLIM3-212ENST00000620787 SLC35F3Q8IY50 421 aa17.92■□□□□ 0.46
PDLIM3-212ENST00000620787 OR5M1Q8NGP8 315 aa17.92■□□□□ 0.46
PDLIM3-212ENST00000620787 ZNF707Q96C28 371 aaPredicted RBP17.92■□□□□ 0.46
PDLIM3-212ENST00000620787 MRPL48Q96GC5 212 aaKnown RBP17.92■□□□□ 0.46
PDLIM3-212ENST00000620787 DMRTA2Q96SC8 542 aa17.92■□□□□ 0.46
PDLIM3-212ENST00000620787 MRI1Q9BV20 369 aa17.92■□□□□ 0.46
PDLIM3-212ENST00000620787 PRDM9Q9NQV7 894 aa17.92■□□□□ 0.46
PDLIM3-212ENST00000620787 MKI67P46013 3256 aaKnown RBP17.92■□□□□ 0.46
PDLIM3-212ENST00000620787 OR6C68A6NDL8 312 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 ANXA2P2A6NMY6 339 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 TOR1AO14656 332 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 GNB5O14775 395 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 CTSVO60911 334 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 SIX6O95475 246 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 TMIGD3P0DMS9 266 aaPredicted RBP17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 ADRA2CP18825 462 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 GRPRP30550 384 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 DLX5P56178 289 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 CST6Q15828 149 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 ZNF684Q5T5D7 378 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 NAXDQ8IW45 347 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 OR6K6Q8NGW6 343 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 CFHR5Q9BXR6 569 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 NMNAT2Q9BZQ4 307 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 TRIM2Q9C040 744 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 KCNJ13O60928 360 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 CTNSO60931 367 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 LDOC1O95751 146 aaPredicted RBP17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 EML2O95834 649 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 MNX1P50219 401 aaPredicted RBP17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 SLC35D3Q5M8T2 416 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 DND1Q8IYX4 353 aaKnown RBP17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 BVESQ8NE79 360 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 GINS4Q9BRT9 223 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 GPR174Q9BXC1 333 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 POLE3Q9NRF9 147 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 MRPS2Q9Y399 296 aaKnown RBP17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 HEBP2Q9Y5Z4 205 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 COLEC10Q9Y6Z7 277 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 COL4A2P08572 1712 aa17.91■□□□□ 0.46
PDLIM3-212ENST00000620787 A0A1W2PP55 124 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 TCRBV16S1A1N1A0A5B0 115 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 GLSO94925 669 aaPredicted RBP17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 ICAM2P13598 275 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 WASP42768 502 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 STPG2Q8N412 459 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 FLVCR1-AS1Q8TAF5 88 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 SEMA4CQ9C0C4 833 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 ARL6Q9H0F7 186 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 TTYH1Q9H313 450 aaPredicted RBP17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 EVA1AQ9H8M9 152 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 RWDD3Q9Y3V2 267 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 ETV7Q9Y603 341 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 NUP210LQ5VU65 1888 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 C5orf42Q9H799 3197 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 TEX46H3BTG2 121 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 IGFALSP35858 605 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 RPL4P36578 427 aaKnown RBP17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 MAT1AQ00266 395 aaKnown RBP17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 OC90Q02509 493 aaPredicted RBP17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 PLA2G7Q13093 441 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 GXYLT1Q4G148 440 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 OR7E24Q6IFN5 339 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 KIRREL2Q6UWL6 708 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 CFAP77Q6ZQR2 320 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 PRSS41Q7RTY9 318 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 RASD2Q96D21 266 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 SGTBQ96EQ0 304 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 LDAHQ9H6V9 325 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 EXOSC3Q9NQT5 275 aaKnown RBP17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 CXXC1Q9P0U4 656 aaPredicted RBP17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 GLS2Q9UI32 602 aa17.9■□□□□ 0.46
PDLIM3-212ENST00000620787 A0A1B0GVT2 93 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 NKX2-2O95096 273 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 ZNF35P13682 527 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 GK2Q14410 553 aaPredicted RBP17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 GSG1LQ6UXU4 331 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 DPY19L2P2Q6ZN68 376 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 OR1S1Q8NH92 325 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 PMEPA1Q969W9 287 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 CAPN10Q9HC96 672 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 LYRM4Q9HD34 91 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 TBC1D29Q9UFV1 150 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 FXYD6-FXYD2A0A087WZ82 144 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 ITPKBP27987 946 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 RBMS2Q15434 407 aaKnown RBP17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 TCEA2Q15560 299 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 C2orf27AQ580R0 203 aa17.89■□□□□ 0.45
PDLIM3-212ENST00000620787 FAM78AQ5JUQ0 283 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms