RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 GOSR1O95249 250 aa14.39□□□□□ -0.11
CD40-207ENST00000620709 RPSAP08865 295 aaKnown RBP14.39□□□□□ -0.11
CD40-207ENST00000620709 ADAM8P78325 824 aa14.39□□□□□ -0.11
CD40-207ENST00000620709 ST3GAL3Q11203 375 aa14.39□□□□□ -0.11
CD40-207ENST00000620709 ENTPD8Q5MY95 495 aa14.39□□□□□ -0.11
CD40-207ENST00000620709 ANKRD34AQ69YU3 496 aa14.39□□□□□ -0.11
CD40-207ENST00000620709 LINC00471Q8N535 108 aa14.39□□□□□ -0.11
CD40-207ENST00000620709 CNBD2Q96M20 576 aa14.39□□□□□ -0.11
CD40-207ENST00000620709 NR1H4Q96RI1 486 aaPredicted RBP14.39□□□□□ -0.11
CD40-207ENST00000620709 TOR3AQ9H497 397 aa14.39□□□□□ -0.11
CD40-207ENST00000620709 CTPS2Q9NRF8 586 aa14.39□□□□□ -0.11
CD40-207ENST00000620709 KRT84Q9NSB2 600 aa14.39□□□□□ -0.11
CD40-207ENST00000620709 ACANP16112 2415 aa14.39□□□□□ -0.11
CD40-207ENST00000620709 IGLV3-32A0A0A0MS00 114 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 A0A1W2PPR1 153 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 ALG1L2C9J202 215 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 CYP7B1O75881 506 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 AQP8O94778 261 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 SYNGR4O95473 234 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 GKN3PP0CG01 181 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 FCGR2AP12318 317 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 TBXA2RP21731 343 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 FUT4P22083 530 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 SLC6A8P48029 635 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 CTBP2P56545 445 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 HOXC5Q00444 222 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 PLAURQ03405 335 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 TRAM2Q15035 370 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 PDK3Q15120 406 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 ZIK1Q3SY52 487 aaPredicted RBP14.38□□□□□ -0.11
CD40-207ENST00000620709 KLHL26Q53HC5 615 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 TTC23Q5W5X9 447 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 GGNQ86UU5 652 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 TSPYL5Q86VY4 417 aaPredicted RBP14.38□□□□□ -0.11
CD40-207ENST00000620709 ZNF555Q8NEP9 628 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 OR9Q2Q8NGE9 314 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 ADAMTS16Q8TE57 1224 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 CNOT9Q92600 299 aaKnown RBP14.38□□□□□ -0.11
CD40-207ENST00000620709 FEVQ99581 238 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 NPAS1Q99742 590 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 FUZQ9BT04 418 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 UBTD1Q9HAC8 227 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 ZNF556Q9HAH1 456 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 MAN2C1Q9NTJ4 1040 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 ELOVL5Q9NYP7 299 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 ZNF226Q9NYT6 803 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 POFUT2Q9Y2G5 429 aa14.38□□□□□ -0.11
CD40-207ENST00000620709 A0A087WZY1 265 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 C16orf97H3BN30 126 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 TNFSF11O14788 317 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 CXCL13O43927 109 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 NUDT14O95848 222 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 CSTAP01040 98 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 NGFRP08138 427 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 PRG2P13727 222 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 UGT2B10P36537 528 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 ADARB1P78563 741 aaKnown RBP14.37□□□□□ -0.11
CD40-207ENST00000620709 IL1RL1Q01638 556 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 ZNF440Q8IYI8 595 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 TOR1AIP2Q8NFQ8 470 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 OR10D3Q8NH80 312 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 B4GALNT2Q8NHY0 566 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 SLC7A13Q8TCU3 470 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 SLC38A4Q969I6 547 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 SLC41A3Q96GZ6 507 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 MBOAT4Q96T53 435 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 GSX1Q9H4S2 264 aaPredicted RBP14.37□□□□□ -0.11
CD40-207ENST00000620709 MED17Q9NVC6 651 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 MCTS1Q9ULC4 181 aaKnown RBP14.37□□□□□ -0.11
CD40-207ENST00000620709 EMC9Q9Y3B6 208 aa14.37□□□□□ -0.11
CD40-207ENST00000620709 FLNAP21333 2647 aaKnown RBP14.37□□□□□ -0.11
CD40-207ENST00000620709 NIPBLQ6KC79 2804 aaeCLIP14.37□□□□□ -0.11
CD40-207ENST00000620709 A0A1W2PQD3 144 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 SH3PXD2BA1X283 911 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 TRAPPC13A5PLN9 417 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 H3BNH8 94 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 OR10H3O60404 316 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 MITFO75030 526 aaPredicted RBP14.36□□□□□ -0.11
CD40-207ENST00000620709 BCAS1O75363 584 aaPredicted RBP14.36□□□□□ -0.11
CD40-207ENST00000620709 ADAP00813 363 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 ZNF17P17021 662 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 CD53P19397 219 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 CBLP22681 906 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 HTR2AP28223 471 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 SEC23BQ15437 767 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 TMEM44Q2T9K0 475 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 ZNF770Q6IQ21 691 aaPredicted RBP14.36□□□□□ -0.11
CD40-207ENST00000620709 KRT80Q6KB66 452 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 PODNL1Q6PEZ8 512 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 FAM214BQ7L5A3 538 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 GALNT5Q7Z7M9 940 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 AQP11Q8NBQ7 271 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 FAM71CQ8NEG0 241 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 WFDC11Q8NEX6 87 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 PHOSPHO1Q8TCT1 267 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 ZBTB8AQ96BR9 441 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 PRR14Q9BWN1 585 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 RIBC2Q9H4K1 309 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 TMEM27Q9HBJ8 222 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 HHATLQ9HCP6 504 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms