RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 HIKESHIQ53FT3 197 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 RABL3Q5HYI8 236 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 COQ5Q5HYK3 327 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 GCNT6Q5T4J0 391 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 LCE2DQ5TA82 110 aaPredicted RBP9.76□□□□□ -0.85
TARDBP-221ENST00000619555 ZNF544Q6NX49 715 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 ZNF836Q6ZNA1 936 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 AAED1Q7RTV5 226 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 PEX5LQ8IYB4 626 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 CLIP4Q8N3C7 705 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 CADM2Q8N3J6 435 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 C17orf78Q8N4C9 275 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 C1orf162Q8NEQ5 155 aaPredicted RBP9.76□□□□□ -0.85
TARDBP-221ENST00000619555 ELOA3Q8NG57 546 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 OR52P1PQ8NH57 321 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 NFKBIDQ8NI38 313 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 NANOS1Q8WY41 292 aaKnown RBP9.76□□□□□ -0.85
TARDBP-221ENST00000619555 TMEM45BQ96B21 275 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 LRRC58Q96CX6 371 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 RCN3Q96D15 328 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 TNFRSF13CQ96RJ3 184 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 REPIN1Q9BWE0 567 aaKnown RBP9.76□□□□□ -0.85
TARDBP-221ENST00000619555 USP22Q9UPT9 525 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 AMDHD2Q9Y303 409 aa9.76□□□□□ -0.85
TARDBP-221ENST00000619555 CDHR4A6H8M9 788 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 RNF212BA8MTL3 300 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 BBIP1A8MTZ0 92 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 H7C417 338 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 IFNA2P01563 188 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 GPIP06744 558 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 COX4I1P13073 169 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 PRG2P13727 222 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 UQCRBP14927 111 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 PPIBP23284 216 aaKnown RBP9.75□□□□□ -0.85
TARDBP-221ENST00000619555 APOBEC3AP31941 199 aaPredicted RBP9.75□□□□□ -0.85
TARDBP-221ENST00000619555 MAP2K6P52564 334 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 PRPS1P60891 318 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 TGFBR3Q03167 851 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 LGALS3BPQ08380 585 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 LOXL1Q08397 574 aaPredicted RBP9.75□□□□□ -0.85
TARDBP-221ENST00000619555 CYLC2Q14093 348 aaPredicted RBP9.75□□□□□ -0.85
TARDBP-221ENST00000619555 MAPRE2Q15555 327 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 CHRFAM7AQ494W8 412 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 MMEL1Q495T6 779 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 C6orf52Q5T4I8 152 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 NANOGP8Q6NSW7 305 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 PODNL1Q6PEZ8 512 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 NET1Q7Z628 596 aaPredicted RBP9.75□□□□□ -0.85
TARDBP-221ENST00000619555 GPAT4Q86UL3 456 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 COMTD1Q86VU5 262 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 ZNF440Q8IYI8 595 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 C10orf105Q8TEF2 133 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 FAM168AQ92567 244 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 CCT8L2Q96SF2 557 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 SF3B5Q9BWJ5 86 aaKnown RBP9.75□□□□□ -0.85
TARDBP-221ENST00000619555 RAD21L1Q9H4I0 556 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 TMEM38AQ9H6F2 299 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 KAT8Q9H7Z6 458 aaKnown RBP9.75□□□□□ -0.85
TARDBP-221ENST00000619555 NANOGQ9H9S0 305 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 FKRPQ9H9S5 495 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 BCL2L10Q9HD36 194 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 MRGBPQ9NV56 204 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 ADPRHL2Q9NX46 363 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 GMPR2Q9P2T1 348 aaKnown RBP9.75□□□□□ -0.85
TARDBP-221ENST00000619555 MOKQ9UQ07 419 aa9.75□□□□□ -0.85
TARDBP-221ENST00000619555 ZNF443Q9Y2A4 671 aaPredicted RBP9.75□□□□□ -0.85
TARDBP-221ENST00000619555 AQP7P3A6NL99 342 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 EVPLLA8MZ36 301 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 LGI1O95970 557 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 SLC25A16P16260 332 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 SELENOPP49908 381 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 P2RY4P51582 365 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 EFNA4P52798 201 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 CDK6Q00534 326 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 CHRNB3Q05901 458 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 SCARB2Q14108 478 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 MST1LQ2TV78 715 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 LIN52Q52LA3 116 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 TMEM225Q6GV28 225 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 WBP2NLQ6ICG8 309 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 C8orf82Q6P1X6 216 aaPredicted RBP9.74□□□□□ -0.85
TARDBP-221ENST00000619555 POMGNT2Q8NAT1 580 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 OR10A6Q8NH74 314 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 RP9Q8TA86 221 aaKnown RBP9.74□□□□□ -0.85
TARDBP-221ENST00000619555 FBXO17Q96EF6 278 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 PIF1Q9H611 641 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 THUMPD1Q9NXG2 353 aaKnown RBP9.74□□□□□ -0.85
TARDBP-221ENST00000619555 CALML5Q9NZT1 146 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 CORO2BQ9UQ03 480 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 ARL2BPQ9Y2Y0 163 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 PMF1-BGLAPU3KQ54 211 aa9.74□□□□□ -0.85
TARDBP-221ENST00000619555 IGHV1-18A0A0C4DH31 117 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 A0A0G2JPF8 293 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 A8MVM7 634 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 HNRNPCL2B2RXH8 293 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 HNRNPCL3B7ZW38 293 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 AIM2O14862 343 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 FRS3O43559 492 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 TPST1O60507 370 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 HNRNPCL1O60812 293 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms