RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 S100PBPQ96BU1 408 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 ZNF775Q96BV0 537 aaPredicted RBP7.28□□□□□ -1.24
NEK3-209ENST00000618856 C7orf34Q96L11 122 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 OXGR1Q96P68 337 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 ZNF587Q96SQ5 575 aaPredicted RBP7.28□□□□□ -1.24
NEK3-209ENST00000618856 EPYCQ99645 322 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 KCTD14Q9BQ13 255 aaPredicted RBP7.28□□□□□ -1.24
NEK3-209ENST00000618856 TMEM204Q9BSN7 226 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 ACTR6Q9GZN1 396 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 MAN2C1Q9NTJ4 1040 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 DCAF13Q9NV06 445 aaKnown RBP7.28□□□□□ -1.24
NEK3-209ENST00000618856 ADPRHL2Q9NX46 363 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 NDE1Q9NXR1 346 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 RIMS3Q9UJD0 308 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 ZNF229Q9UJW7 825 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 SLC7A7Q9UM01 511 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 RCE1Q9Y256 329 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 MAP1AP78559 2803 aaPredicted RBP7.27□□□□□ -1.25
NEK3-209ENST00000618856 OR6C65A6NJZ3 312 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 LRRN3E7EW58 273 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 RPL36A-HNRNPH2H7BZ11 118 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 PLPP3O14495 311 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 HPRP00739 348 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 SERPINA1P01009 418 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 MT-ND1P03886 318 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 ITGA5P08648 1049 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 FUT4P22083 530 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 FOXG1P55316 489 aaPredicted RBP7.27□□□□□ -1.25
NEK3-209ENST00000618856 TESK1Q15569 626 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 GABRA6Q16445 453 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 SAMD4BQ5PRF9 694 aaKnown RBP7.27□□□□□ -1.25
NEK3-209ENST00000618856 TIMM23BQ5SRD1 257 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 TSPO2Q5TGU0 170 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 TMEM225Q6GV28 225 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 GLYATQ6IB77 296 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 TTC33Q6PID6 262 aaPredicted RBP7.27□□□□□ -1.25
NEK3-209ENST00000618856 C16orf89Q6UX73 402 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 LINGO2Q7L985 606 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.27□□□□□ -1.25
NEK3-209ENST00000618856 SLC46A3Q7Z3Q1 461 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 PXKQ7Z7A4 578 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 NKAIN4Q8IVV8 208 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 ZNF100Q8IYN0 542 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 OFCC1Q8IZS5 231 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 TMEM123Q8N131 208 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 ARHGAP24Q8N264 748 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 POMGNT2Q8NAT1 580 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 C1orf162Q8NEQ5 155 aaPredicted RBP7.27□□□□□ -1.25
NEK3-209ENST00000618856 GEMIN6Q8WXD5 167 aaKnown RBP7.27□□□□□ -1.25
NEK3-209ENST00000618856 LZICQ8WZA0 190 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 HSD17B8Q92506 261 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 SLC25A36Q96CQ1 311 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 NSL1Q96IY1 281 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 HSH2DQ96JZ2 352 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 PRRC1Q96M27 445 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 CDRT15Q96T59 188 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 LINC00470Q9BZP3 86 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 KLHL4Q9C0H6 718 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 C1orf21Q9H246 121 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 CLEC4MQ9H2X3 399 aaPredicted RBP7.27□□□□□ -1.25
NEK3-209ENST00000618856 FKRPQ9H9S5 495 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 SLC7A10Q9NS82 523 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 ZNF226Q9NYT6 803 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 TAS2R5Q9NYW4 299 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 SELENONQ9NZV5 590 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 SNX13Q9Y5W8 968 aa7.27□□□□□ -1.25
NEK3-209ENST00000618856 ABCA4P78363 2273 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 OR5H1A6NKK0 313 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 IFNW1P05000 195 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 HLA-DOBP13765 273 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 NCK1P16333 377 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 CALB2P22676 271 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 SELENOPP49908 381 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 UGT2B15P54855 530 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 TAS2R41P59536 307 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 PUDPQ08623 228 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 ST3GAL3Q11203 375 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 FHL1Q13642 323 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 TSC22D1Q15714 1073 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 TAB1Q15750 504 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 IFI44LQ53G44 452 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 ANKRD34AQ69YU3 496 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 ADAM5Q6NVV9 412 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 BHLHA15Q7RTS1 189 aaPredicted RBP7.26□□□□□ -1.25
NEK3-209ENST00000618856 AAED1Q7RTV5 226 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 GPAT4Q86UL3 456 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 WDFY1Q8IWB7 410 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 DEFB107AQ8IZN7 70 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 KDM8Q8N371 416 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 C17orf78Q8N4C9 275 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 RNF148Q8N7C7 305 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 WDR31Q8NA23 367 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 FAM156AQ8NDB6 213 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 RBM15BQ8NDT2 890 aaKnown RBP7.26□□□□□ -1.25
NEK3-209ENST00000618856 PIK3C3Q8NEB9 887 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 OR5J2Q8NH18 312 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 TMEM255BQ8WV15 326 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 TMEM239Q8WW34 195 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 IGFBPL1Q8WX77 278 aa7.26□□□□□ -1.25
NEK3-209ENST00000618856 NINJ1Q92982 152 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms