RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ZNF99A8MXY4 864 aaPredicted RBP3.88□□□□□ -1.79
SNCA-213ENST00000618500 GOLGA6L6A8MZA4 724 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 TNFRSF13BO14836 293 aaPredicted RBP3.88□□□□□ -1.79
SNCA-213ENST00000618500 PPIHO43447 177 aaKnown RBP3.88□□□□□ -1.79
SNCA-213ENST00000618500 NPIPB7O75200 414 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 SLC43A1O75387 559 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 STX11O75558 287 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 TSPAN9O75954 239 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 IGHV3-13P01766 116 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 MT-ND5P03915 603 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 GSTA1P08263 222 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 TAC1P20366 129 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 FUT4P22083 530 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 VAMP1P23763 118 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 HMOX2P30519 316 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 MSMPQ1L6U9 139 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 EPHX4Q8IUS5 362 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 C20orf196Q8IYI0 205 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 TMEM123Q8N131 208 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 DTX3Q8N9I9 347 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 GATSQ8NAP1 163 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 ZNF519Q8TB69 540 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 PPCDCQ96CD2 204 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 COQ8BQ96D53 544 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 THOC1Q96FV9 657 aaKnown RBP3.88□□□□□ -1.79
SNCA-213ENST00000618500 MS4A14Q96JA4 679 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 TMEM237Q96Q45 408 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 SDF2Q99470 211 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 EVA1AQ9H8M9 152 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 ANKZF1Q9H8Y5 726 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 GPR35Q9HC97 309 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 HINT3Q9NQE9 182 aaKnown RBP3.88□□□□□ -1.79
SNCA-213ENST00000618500 ASIC5Q9NY37 505 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 TBK1Q9UHD2 729 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 TET2Q6N021 2002 aaPredicted RBP3.88□□□□□ -1.79
SNCA-213ENST00000618500 MED12Q93074 2177 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 DNAH9Q9NYC9 4486 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 TMED7-TICAM2A0A0A6YYA0 188 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 A0A1W2PR80 420 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 CENPBD1B2RD01 187 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 POC1B-GALNT4F8VUJ3 575 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 C3orf84H3BNL1 204 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 UGT2B17O75795 530 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 TSPAN15O95858 294 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 LGI1O95970 557 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 OPN1LWP04000 364 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 MYZAPP0CAP1 466 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 UQCRBP14927 111 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 CHN1P15882 459 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 SSTR1P30872 391 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 CXCR5P32302 372 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 CRHR1P34998 444 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 HPCAL1P37235 193 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 TERF1P54274 439 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 DNAJB13P59910 316 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 TRMT5Q32P41 509 aaKnown RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 LSM12Q3MHD2 195 aaKnown RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 ZNF385BQ569K4 471 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 OTUD3Q5T2D3 398 aaPredicted RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 MBNL2Q5VZF2 373 aaKnown RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 C3orf62Q6ZUJ4 267 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 MYPOPQ86VE0 399 aaPredicted RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 DDIASQ8IXT1 998 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 GALNT4Q8N4A0 578 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 ARFGAP2Q8N6H7 521 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 BHLHE22Q8NFJ8 381 aaPredicted RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 MFSD8Q8NHS3 518 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 ST7LQ8TDW4 575 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 C10orf82Q8WW14 230 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 CFHR4Q92496 578 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 SLC9A6Q92581 669 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 OR7D2Q96RA2 312 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 CCT8L2Q96SF2 557 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 SLC30A2Q9BRI3 323 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 PATZ1Q9HBE1 687 aaKnown RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 RRAGDQ9NQL2 400 aaPredicted RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 TMED7Q9Y3B3 224 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 VWFP04275 2813 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 A6NHS1 94 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 P2RY10O00398 339 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 DHHO43323 396 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 LYPLA1O75608 230 aaPredicted RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 PTHP01270 115 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 TFPTP0C1Z6 253 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 ATP5F1P24539 256 aaPredicted RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 LSP1P33241 339 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 ROR2Q01974 943 aaKnown RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 EPS8Q12929 822 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 HERPUD1Q15011 391 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 ZNF551Q7Z340 670 aaPredicted RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 MDP1Q86V88 176 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 MUC20Q8N307 709 aaPredicted RBP3.87□□□□□ -1.79
SNCA-213ENST00000618500 PIK3C3Q8NEB9 887 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 OR1J2Q8NGS2 313 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 GSTO2Q9H4Y5 243 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 ACSS3Q9H6R3 686 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 SEC61A2Q9H9S3 476 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 ATAD3AQ9NVI7 634 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 ZDHHC8Q9ULC8 765 aa3.87□□□□□ -1.79
SNCA-213ENST00000618500 IGHV2-70DA0A0C4DH43 119 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms