RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 ZNF845Q96IR2 970 aaPredicted RBP7.66□□□□□ -1.18
GPC6-202ENST00000617456 MARK4Q96L34 752 aa7.66□□□□□ -1.18
GPC6-202ENST00000617456 KCNA7Q96RP8 456 aa7.66□□□□□ -1.18
GPC6-202ENST00000617456 ZNF347Q96SE7 839 aa7.66□□□□□ -1.18
GPC6-202ENST00000617456 NEU1Q99519 415 aa7.66□□□□□ -1.18
GPC6-202ENST00000617456 C1orf50Q9BV19 199 aa7.66□□□□□ -1.18
GPC6-202ENST00000617456 TRIM2Q9C040 744 aa7.66□□□□□ -1.18
GPC6-202ENST00000617456 MYLK2Q9H1R3 596 aa7.66□□□□□ -1.18
GPC6-202ENST00000617456 GLIPR2Q9H4G4 154 aa7.66□□□□□ -1.18
GPC6-202ENST00000617456 REEP4Q9H6H4 257 aa7.66□□□□□ -1.18
GPC6-202ENST00000617456 LRTM1Q9HBL6 345 aa7.66□□□□□ -1.18
GPC6-202ENST00000617456 NPHS2Q9NP85 383 aa7.66□□□□□ -1.18
GPC6-202ENST00000617456 RPRD1BQ9NQG5 326 aaKnown RBP7.66□□□□□ -1.18
GPC6-202ENST00000617456 LGALS13Q9UHV8 139 aa7.66□□□□□ -1.18
GPC6-202ENST00000617456 DKKL1Q9UK85 242 aa7.66□□□□□ -1.18
GPC6-202ENST00000617456 FBXL2Q9UKC9 423 aa7.66□□□□□ -1.18
GPC6-202ENST00000617456 MRPS7Q9Y2R9 242 aaKnown RBP7.66□□□□□ -1.18
GPC6-202ENST00000617456 AP4B1Q9Y6B7 739 aa7.66□□□□□ -1.18
GPC6-202ENST00000617456 PRR14LQ5THK1 2151 aa7.66□□□□□ -1.18
GPC6-202ENST00000617456 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.65□□□□□ -1.18
GPC6-202ENST00000617456 ISPDA4D126 451 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 RAB19A4D1S5 217 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 C7orf72A4D263 438 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 SLC22A20A6NK97 555 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 ALG1L2C9J202 215 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 TXNL1O43396 289 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 CCNB2O95067 398 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 NKX2-2O95096 273 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 PLAUP00749 431 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 SHBGP04278 402 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 JUNP05412 331 aaKnown RBP7.65□□□□□ -1.18
GPC6-202ENST00000617456 FABP1P07148 127 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 TRAPPC2P0DI81 140 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 TRAPPC2BP0DI82 140 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 T-ENOLP0DO92 83 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 COX5BP10606 129 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 PRG2P13727 222 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 APEHP13798 732 aaKnown RBP7.65□□□□□ -1.18
GPC6-202ENST00000617456 CBR1P16152 277 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 HK1P19367 917 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 KIR2DL2P43627 348 aaPredicted RBP7.65□□□□□ -1.18
GPC6-202ENST00000617456 KIR3DL2P43630 455 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 PRIM2P49643 509 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 BMXP51813 675 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 CLDN18P56856 261 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 RPP30P78346 268 aaKnown RBP7.65□□□□□ -1.18
GPC6-202ENST00000617456 BTKQ06187 659 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.65□□□□□ -1.18
GPC6-202ENST00000617456 CLEC12BQ2HXU8 276 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 EXOC3L2Q2M3D2 409 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 TRMT5Q32P41 509 aaKnown RBP7.65□□□□□ -1.18
GPC6-202ENST00000617456 RUNDC3AQ59EK9 446 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 DMRTA1Q5VZB9 504 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 OR5M10Q6IEU7 315 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 RAB12Q6IQ22 244 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 ARPINQ7Z6K5 226 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 SLC43A2Q8N370 569 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 BANPQ8N9N5 519 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 ZNF610Q8N9Z0 462 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 PLPP7Q8NBV4 271 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 OR4K17Q8NGC6 315 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 PSMA8Q8TAA3 256 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 FAM110BQ8TC76 370 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 OIT3Q8WWZ8 545 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 CPNE4Q96A23 557 aaPredicted RBP7.65□□□□□ -1.18
GPC6-202ENST00000617456 PPP3R2Q96LZ3 170 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 ZNF556Q9HAH1 456 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 ZNF701Q9NV72 531 aaPredicted RBP7.65□□□□□ -1.18
GPC6-202ENST00000617456 ELOVL5Q9NYP7 299 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 PPP4R1LQ9P1A2 415 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 ASH2LQ9UBL3 628 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 IL19Q9UHD0 177 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 KCNK7Q9Y2U2 307 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 DNAJC15Q9Y5T4 150 aa7.65□□□□□ -1.18
GPC6-202ENST00000617456 A0A1W2PQD3 144 aa7.64□□□□□ -1.19
GPC6-202ENST00000617456 H3BSA7 217 aa7.64□□□□□ -1.19
GPC6-202ENST00000617456 GPR171O14626 319 aa7.64□□□□□ -1.19
GPC6-202ENST00000617456 PHF1O43189 567 aaPredicted RBP7.64□□□□□ -1.19
GPC6-202ENST00000617456 IFNA4P05014 189 aa7.64□□□□□ -1.19
GPC6-202ENST00000617456 THBDP07204 575 aa7.64□□□□□ -1.19
GPC6-202ENST00000617456 CD8BP10966 210 aa7.64□□□□□ -1.19
GPC6-202ENST00000617456 FCGR2AP12318 317 aa7.64□□□□□ -1.19
GPC6-202ENST00000617456 BMP2P12643 396 aa7.64□□□□□ -1.19
GPC6-202ENST00000617456 ZNF17P17021 662 aa7.64□□□□□ -1.19
GPC6-202ENST00000617456 TBXA2RP21731 343 aa7.64□□□□□ -1.19
GPC6-202ENST00000617456 MANFP55145 182 aaKnown RBP7.64□□□□□ -1.19
GPC6-202ENST00000617456 B3GALT5-AS1P59052 145 aa7.64□□□□□ -1.19
GPC6-202ENST00000617456 MAGOHP61326 146 aaKnown RBP7.64□□□□□ -1.19
GPC6-202ENST00000617456 ZNF155Q12901 538 aaPredicted RBP7.64□□□□□ -1.19
GPC6-202ENST00000617456 MAD2L1Q13257 205 aaPredicted RBP7.64□□□□□ -1.19
GPC6-202ENST00000617456 ZNF846Q147U1 533 aa7.64□□□□□ -1.19
GPC6-202ENST00000617456 PCLAFQ15004 111 aa7.64□□□□□ -1.19
GPC6-202ENST00000617456 C21orf62-AS1Q17RA5 79 aa7.64□□□□□ -1.19
GPC6-202ENST00000617456 TMEM44Q2T9K0 475 aa7.64□□□□□ -1.19
GPC6-202ENST00000617456 UGT3A2Q3SY77 523 aa7.64□□□□□ -1.19
GPC6-202ENST00000617456 MMEL1Q495T6 779 aa7.64□□□□□ -1.19
GPC6-202ENST00000617456 RFTN2Q52LD8 501 aaPredicted RBP7.64□□□□□ -1.19
GPC6-202ENST00000617456 BEX5Q5H9J7 111 aa7.64□□□□□ -1.19
GPC6-202ENST00000617456 EXOSC6Q5RKV6 272 aaKnown RBP7.64□□□□□ -1.19
GPC6-202ENST00000617456 ZBTB37Q5TC79 503 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms