RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 TAS2R5Q9NYW4 299 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 ING1Q9UK53 422 aaPredicted RBP7.05□□□□□ -1.28
NEK3-207ENST00000617054 GRIP1Q9Y3R0 1128 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 SIRT4Q9Y6E7 314 aaPredicted RBP7.05□□□□□ -1.28
NEK3-207ENST00000617054 RTTNQ86VV8 2226 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 FAM186AA6NE01 2351 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 A0A1W2PQD3 144 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 A0A1W2PQL4 384 aaPredicted RBP7.05□□□□□ -1.28
NEK3-207ENST00000617054 SNTNA6NMZ2 147 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 SLC22A1O15245 554 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 SELENOFO60613 162 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 CLPXO76031 633 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 ONECUT2O95948 504 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 MT-CO3P00414 261 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 CELA3AP09093 270 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 CLEC2LP0C7M8 214 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 ASAH2BP0C7U1 165 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 PTGDSP41222 190 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 CRYBB2P43320 205 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 OR12D2P58182 307 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 FOXF1Q12946 379 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 C1DQ13901 141 aaKnown RBP7.05□□□□□ -1.28
NEK3-207ENST00000617054 MELKQ14680 651 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 C6orf15Q6UXA7 325 aaPredicted RBP7.05□□□□□ -1.28
NEK3-207ENST00000617054 NANOGNBQ7Z5D8 188 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 BPHLQ86WA6 291 aaPredicted RBP7.05□□□□□ -1.28
NEK3-207ENST00000617054 WDFY1Q8IWB7 410 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 DEFB124Q8NES8 71 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 C9orf43Q8TAL5 461 aaPredicted RBP7.05□□□□□ -1.28
NEK3-207ENST00000617054 SMPDL3BQ92485 455 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 DMRTB1Q96MA1 342 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 UBL7Q96S82 380 aaPredicted RBP7.05□□□□□ -1.28
NEK3-207ENST00000617054 PTDSS2Q9BVG9 487 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 NRIP3Q9NQ35 241 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 PPP4R1LQ9P1A2 415 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 CPAMD8Q8IZJ3 1885 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 A0A087WV48 116 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 DAPL1A0PJW8 107 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 TVP23AA6NH52 213 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 H3BSH0 61 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 J3QLW9 94 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 RNF13O43567 381 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 EIF4E2O60573 245 aaKnown RBP7.05□□□□□ -1.28
NEK3-207ENST00000617054 HIST1H2ABP04908 130 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 CCL3P10147 92 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 TFPIP10646 304 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 ZNF19P17023 458 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 PRKCAP17252 672 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 C17orf67Q0P5P2 114 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 TGIF1Q15583 401 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 TRIP6Q15654 476 aaKnown RBP7.05□□□□□ -1.28
NEK3-207ENST00000617054 HIST3H2AQ7L7L0 130 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 LSM14AQ8ND56 463 aaKnown RBP7.05□□□□□ -1.28
NEK3-207ENST00000617054 HIST1H2ACQ93077 130 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 SLC35B4Q969S0 331 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 STRADBQ9C0K7 418 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 SLIRPQ9GZT3 109 aaKnown RBP7.05□□□□□ -1.28
NEK3-207ENST00000617054 ADGRL4Q9HBW9 690 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 FGF20Q9NP95 211 aaPredicted RBP7.05□□□□□ -1.28
NEK3-207ENST00000617054 MED17Q9NVC6 651 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 PPIEQ9UNP9 301 aaKnown RBP7.05□□□□□ -1.28
NEK3-207ENST00000617054 EXPH5Q8NEV8 1989 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 PCSK5Q92824 1860 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 A0A1W2PNR3 127 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 ARHGEF9O43307 516 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 TFP02787 698 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 KLK2P20151 261 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 SLC2A5P22732 501 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 SFTPDP35247 375 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 ACVR1BP36896 505 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 RPS19P39019 145 aaKnown RBP7.04□□□□□ -1.28
NEK3-207ENST00000617054 SLC6A8P48029 635 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 GPR85P60893 370 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 RPS4XP62701 263 aaKnown RBP7.04□□□□□ -1.28
NEK3-207ENST00000617054 RUNX1T1Q06455 604 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 IL10RAQ13651 578 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 OR7A5Q15622 319 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 ETFDHQ16134 617 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 ZSWIM7Q19AV6 140 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 C1orf140Q5VVS0 124 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 RPL13AP3Q6NVV1 102 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 DPY19L2P2Q6ZN68 376 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 WDSUB1Q8N9V3 476 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 ZNF417Q8TAU3 575 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 ZFAND2BQ8WV99 257 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 SPACA9Q96E40 222 aaPredicted RBP7.04□□□□□ -1.28
NEK3-207ENST00000617054 TSPAN32Q96QS1 320 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 ZNF587Q96SQ5 575 aaPredicted RBP7.04□□□□□ -1.28
NEK3-207ENST00000617054 ALG8Q9BVK2 526 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 SNTG1Q9NSN8 517 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 MRPS18AQ9NVS2 196 aaKnown RBP7.04□□□□□ -1.28
NEK3-207ENST00000617054 GRHPRQ9UBQ7 328 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 PCDHGB2Q9Y5G2 931 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 CHCHD2Q9Y6H1 151 aaPredicted RBP7.04□□□□□ -1.28
NEK3-207ENST00000617054 A0A1W2PPK0 400 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 CD8B2A6NJW9 211 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 B4E171 279 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 J3QRE1 110 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 TNFSF15O95150 251 aa7.04□□□□□ -1.28
NEK3-207ENST00000617054 BGLAPP02818 100 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms