RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 MPEG1Q2M385 716 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 TMEM176BQ3YBM2 270 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 CCDC58Q4VC31 144 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 ESPNLQ6ZVH7 1005 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 PHC2Q8IXK0 858 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 OR11A1Q9GZK7 315 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 PISDQ9UG56 409 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 SPTY2D1-AS1A0A0U1RR47 76 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 EEF1E1-BLOC1S5C9J1V9 151 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 SIGLEC6O43699 453 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 AKR7A3O95154 331 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 ZNF16P17020 682 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 S100GP29377 79 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 BIDP55957 195 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 GPR50Q13585 617 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 TATDN3Q17R31 274 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 RPL22L1Q6P5R6 122 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 Q6ZNX1 250 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 RNF165Q6ZSG1 346 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 SLC35F3Q8IY50 421 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 INO80EQ8NBZ0 244 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 LRRC20Q8TCA0 184 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 GIMAP1Q8WWP7 306 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 SLC25A44Q96H78 314 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 FKBP14Q9NWM8 211 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 RCE1Q9Y256 329 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 TRAV36DV7A0A075B6V5 113 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 C5orf67F2Z3F1 127 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 M0R233 179 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 P2RY10O00398 339 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 ELK1P19419 428 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 OR7G1Q8NGA0 311 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 CREB3L1Q96BA8 519 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 RBM38Q9H0Z9 239 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 DUSP21Q9H596 190 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 ZNF160Q9HCG1 818 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 SRPK3Q9UPE1 567 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 SCN5AQ14524 2016 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 PAHP00439 452 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 IFNA7P01567 189 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 SFTPBP07988 381 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 ENDOUP21128 410 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 GABRR1P24046 479 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 HLA-DMAP28067 261 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 RPS15P62841 145 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 SMAD4Q13485 552 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 ZNF628Q5EBL2 1059 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 APOOLQ6UXV4 268 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 SLC16A12Q6ZSM3 486 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 Q7L0L9 218 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 DVL3Q92997 716 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 SLC46A1Q96NT5 459 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 NRIP3Q9NQ35 241 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 SCP2D1Q9UJQ7 156 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 POMT2Q9UKY4 750 aa8.2□□□□□ -1.1
PDLIM5-222ENST00000615540 TEX13DA0A0J9YY54 714 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 FAM230AA0A1W2PPH8 454 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 A6NIZ1 184 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 ALOX12BO75342 701 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 EIF4EP06730 217 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 EVI2BP34910 448 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 CCR5P51681 352 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 RAP1BP61224 184 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 RAP1AP62834 184 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 SWI5Q1ZZU3 235 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 CD163Q86VB7 1156 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 LRRC28Q86X40 367 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 SP7Q8TDD2 431 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 C15orf40Q8WUR7 153 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 NKX3-1Q99801 234 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 EMC9Q9Y3B6 208 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 NUBP2Q9Y5Y2 271 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 FFAR1O14842 300 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 SRFP11831 508 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 RAB3AP20336 220 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 LSM11P83369 360 aaKnown RBP eCLIP8.19□□□□□ -1.11e-7■■■■■ 32.8
PDLIM5-222ENST00000615540 GALEQ14376 348 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 ZXDCQ2QGD7 858 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 COL28A1Q2UY09 1125 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 MANEAQ5SRI9 462 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 ABHD12BQ7Z5M8 362 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 TMEM17Q86X19 198 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 RDH10Q8IZV5 341 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 CADM3Q8N126 398 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 GPR119Q8TDV5 335 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 CDCA4Q9BXL8 241 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 ANKRD19PQ9H560 264 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 LIN7BQ9HAP6 207 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 AKIP1Q9NQ31 210 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 DNAH14Q0VDD8 3507 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 TMEM269A0A1B0GVZ9 245 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 LDOC1O95751 146 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 ZNF28P17035 718 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 DNASE1P24855 282 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 MLC1Q15049 377 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 TBC1D25Q3MII6 688 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 GLYR1Q49A26 553 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 VN1R4Q7Z5H5 301 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 NOXA1Q86UR1 476 aa8.19□□□□□ -1.1
PDLIM5-222ENST00000615540 ZNF100Q8IYN0 542 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms