RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 SYTL3Q4VX76 610 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 GPRC6AQ5T6X5 926 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 TTC23Q5W5X9 447 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 GLDNQ6ZMI3 551 aaPredicted RBP2.78□□□□□ -1.96
CBWD3-209ENST00000614377 FAM220AQ7Z4H9 259 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 CCDC190Q86UF4 302 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 BOD1L2Q8IYS8 172 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 MTURNQ8N3F0 131 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 PARP16Q8N5Y8 322 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 NUP43Q8NFH3 380 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 OR10K1Q8NGX5 313 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 OR5J2Q8NH18 312 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 SPPL2BQ8TCT7 592 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 ORAOV1Q8WV07 137 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 RAB40AQ8WXH6 277 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 ASB15Q8WXK1 588 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 FCGR1BQ92637 280 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 YIPF6Q96EC8 236 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 PLPPR2Q96GM1 343 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 TCTN2Q96GX1 697 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 OR8B4Q96RC9 309 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 AGPAT1Q99943 283 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 MECRQ9BV79 373 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 SUCNR1Q9BXA5 334 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 ARV1Q9H2C2 271 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 MTHFD2LQ9H903 347 aaPredicted RBP2.78□□□□□ -1.96
CBWD3-209ENST00000614377 LYRM4Q9HD34 91 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 SSU72Q9NP77 194 aaKnown RBP2.78□□□□□ -1.96
CBWD3-209ENST00000614377 SLAMF7Q9NQ25 335 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 MIEF1Q9NQG6 463 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 OR2S2Q9NQN1 319 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 CYSLTR2Q9NS75 346 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 LIN7CQ9NUP9 197 aaKnown RBP2.78□□□□□ -1.96
CBWD3-209ENST00000614377 SIDT1Q9NXL6 827 aaKnown RBP2.78□□□□□ -1.96
CBWD3-209ENST00000614377 AJAP1Q9UKB5 411 aaPredicted RBP2.78□□□□□ -1.96
CBWD3-209ENST00000614377 FOXA2Q9Y261 457 aaPredicted RBP2.78□□□□□ -1.96
CBWD3-209ENST00000614377 CARHSP1Q9Y2V2 147 aaKnown RBP2.78□□□□□ -1.96
CBWD3-209ENST00000614377 DUSP10Q9Y6W6 482 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 MADDQ8WXG6 1647 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 FER1L6Q2WGJ9 1857 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 LTN1O94822 1766 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 CROCCQ5TZA2 2017 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 COL5A2P05997 1499 aaPredicted RBP2.78□□□□□ -1.96
CBWD3-209ENST00000614377 TMEM72A0PK05 275 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 GRXCR1A8MXD5 290 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 B4DXG7 233 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 D6RAR5 112 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 E7EWF7 191 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 M0R036 132 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 DFFAO00273 331 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 SIVA1O15304 175 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 CYB5BO43169 146 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 SNAI2O43623 268 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 ABHD16AO95870 558 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 HPP00738 406 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 HPRP00739 348 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 SERPINA1P01009 418 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 IFNA5P01569 189 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 C1GALT1C1LP0DN25 315 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 CETPP11597 493 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 ZNF28P17035 718 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 RAB6AP20340 208 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 COMTP21964 271 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 FBLP22087 321 aaKnown RBP2.78□□□□□ -1.96
CBWD3-209ENST00000614377 ADRA1AP35348 466 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 PNPLA4P41247 253 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 PXNP49023 591 aaPredicted RBP2.78□□□□□ -1.96
CBWD3-209ENST00000614377 CDH11P55287 796 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 RRAS2P62070 204 aaPredicted RBP2.78□□□□□ -1.96
CBWD3-209ENST00000614377 RPS6P62753 249 aaKnown RBP2.78□□□□□ -1.96
CBWD3-209ENST00000614377 PPP3R1P63098 170 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 PAX5Q02548 391 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 ADPRMQ3LIE5 342 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 ITPRIPL2Q3MIP1 535 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 SLC36A2Q495M3 483 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 COX19Q49B96 90 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 LRIF1Q5T3J3 769 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 ZNF529Q6P280 563 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 CD300LDQ6UXZ3 194 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 B3GLCTQ6Y288 498 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 RASSF6Q6ZTQ3 369 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 SPRED2Q7Z698 418 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 XYLT1Q86Y38 959 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 GABRG1Q8N1C3 465 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 SIDT2Q8NBJ9 832 aaKnown RBP2.78□□□□□ -1.96
CBWD3-209ENST00000614377 PXT1Q8NFP0 134 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 OR4Q3Q8NH05 313 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 M1APQ8TC57 530 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 ALG3Q92685 438 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 TGM7Q96PF1 710 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 PHB2Q99623 299 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 FTHL17Q9BXU8 183 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 SLC29A3Q9BZD2 475 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 TBL1XR1Q9BZK7 514 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 STRADBQ9C0K7 418 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 ACTR8Q9H981 624 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 ANKRA2Q9H9E1 313 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 DNAJC4Q9NNZ3 241 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 SLCO1B3Q9NPD5 702 aa2.78□□□□□ -1.96
CBWD3-209ENST00000614377 IL17RBQ9NRM6 502 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms