RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 SIGIRRQ6IA17 410 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 ZNF836Q6ZNA1 936 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 CCDC103Q8IW40 242 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 CMIPQ8IY22 773 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 MICU2Q8IYU8 434 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 PITX2Q99697 317 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 DIABLOQ9NR28 239 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 PLCXD1Q9NUJ7 323 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 DNAJB12Q9NXW2 375 aaKnown RBP11.59□□□□□ -0.55
CCL4-201ENST00000613947 NDRG4Q9ULP0 352 aaKnown RBP11.59□□□□□ -0.55
CCL4-201ENST00000613947 ZNF443Q9Y2A4 671 aaPredicted RBP11.59□□□□□ -0.55
CCL4-201ENST00000613947 ZNF337Q9Y3M9 751 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 CHST2Q9Y4C5 530 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 DOPEY2Q9Y3R5 2298 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 A0A087WZY1 265 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 CDHR4A6H8M9 788 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 CENPXA8MT69 81 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 CXCR6O00574 342 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 ADAM11O75078 769 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 SEMA7AO75326 666 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 GCM2O75603 506 aaPredicted RBP11.59□□□□□ -0.55
CCL4-201ENST00000613947 ACTL6AO96019 429 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 SPNP16150 400 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 PRKCAP17252 672 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 MAP2K4P45985 399 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 RPS5P46782 204 aaKnown RBP11.59□□□□□ -0.55
CCL4-201ENST00000613947 SUMO3P55854 103 aaPredicted RBP11.59□□□□□ -0.55
CCL4-201ENST00000613947 PCBP3P57721 371 aaKnown RBP11.59□□□□□ -0.55
CCL4-201ENST00000613947 EEF1A1P68104 462 aaKnown RBP11.59□□□□□ -0.55
CCL4-201ENST00000613947 CBFBQ13951 182 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 MAD2L1BPQ15013 274 aaPredicted RBP11.59□□□□□ -0.55
CCL4-201ENST00000613947 LARS2Q15031 903 aaKnown RBP11.59□□□□□ -0.55
CCL4-201ENST00000613947 TBCEQ15813 527 aaPredicted RBP11.59□□□□□ -0.55
CCL4-201ENST00000613947 VMACQ2NL98 169 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 TMEM44Q2T9K0 475 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 GLYR1Q49A26 553 aaPredicted RBP11.59□□□□□ -0.55
CCL4-201ENST00000613947 ZNF311Q5JNZ3 666 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 KDM4DQ6B0I6 523 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 ZNF585AQ6P3V2 769 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 ENPP6Q6UWR7 440 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 PARP16Q8N5Y8 322 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 TOR1AIP2Q8NFQ8 470 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 CNIH3Q8TBE1 160 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 PIGQQ9BRB3 760 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 ALKBH4Q9NXW9 302 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 ANGPT4Q9Y264 503 aa11.59□□□□□ -0.55
CCL4-201ENST00000613947 FLNBO75369 2602 aaKnown RBP11.58□□□□□ -0.56
CCL4-201ENST00000613947 AIREO43918 545 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 THBS1P07996 1170 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 M6PRP20645 277 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 CHMP24386 653 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 LHX2P50458 406 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 ARHGDIAP52565 204 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 UGT2B15P54855 530 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 CASP6P55212 293 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 OR2B6P58173 313 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 LSM3P62310 102 aaKnown RBP11.58□□□□□ -0.56
CCL4-201ENST00000613947 SRSF1Q07955 248 aaKnown RBP eCLIP11.58□□□□□ -0.56
CCL4-201ENST00000613947 DUSP7Q16829 419 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 SMUG1Q53HV7 270 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 ATAD3CQ5T2N8 411 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 FJX1Q86VR8 437 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 KRT73Q86Y46 540 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 GTPBP8Q8N3Z3 284 aaPredicted RBP11.58□□□□□ -0.56
CCL4-201ENST00000613947 ZNF540Q8NDQ6 660 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 POC1BQ8TC44 478 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 FIG4Q92562 907 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 FAM162AQ96A26 154 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 ZBTB8AQ96BR9 441 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 WDYHV1Q96HA8 205 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 ZNF607Q96SK3 696 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 SPATA9Q9BWV2 254 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 CACYBPQ9HB71 228 aaKnown RBP11.58□□□□□ -0.56
CCL4-201ENST00000613947 EXOSC3Q9NQT5 275 aaKnown RBP11.58□□□□□ -0.56
CCL4-201ENST00000613947 ERRFI1Q9UJM3 462 aaPredicted RBP11.58□□□□□ -0.56
CCL4-201ENST00000613947 GMPPBQ9Y5P6 360 aa11.58□□□□□ -0.56
CCL4-201ENST00000613947 CCL21O00585 134 aa11.57□□□□□ -0.56
CCL4-201ENST00000613947 FAM20BO75063 409 aa11.57□□□□□ -0.56
CCL4-201ENST00000613947 GKN3PP0CG01 181 aa11.57□□□□□ -0.56
CCL4-201ENST00000613947 PCGF2P35227 344 aa11.57□□□□□ -0.56
CCL4-201ENST00000613947 NKX2-5P52952 324 aaPredicted RBP11.57□□□□□ -0.56
CCL4-201ENST00000613947 IST1P53990 364 aa11.57□□□□□ -0.56
CCL4-201ENST00000613947 SRYQ05066 204 aa11.57□□□□□ -0.56
CCL4-201ENST00000613947 QPRTQ15274 297 aa11.57□□□□□ -0.56
CCL4-201ENST00000613947 ZFP69Q49AA0 526 aa11.57□□□□□ -0.56
CCL4-201ENST00000613947 C4orf17Q53FE4 359 aa11.57□□□□□ -0.56
CCL4-201ENST00000613947 SLC46A3Q7Z3Q1 461 aa11.57□□□□□ -0.56
CCL4-201ENST00000613947 TMEM179BQ7Z7N9 219 aa11.57□□□□□ -0.56
CCL4-201ENST00000613947 FAM86B1Q8N7N1 296 aa11.57□□□□□ -0.56
CCL4-201ENST00000613947 RELTQ969Z4 430 aa11.57□□□□□ -0.56
CCL4-201ENST00000613947 PYURFQ96I23 114 aa11.57□□□□□ -0.56
CCL4-201ENST00000613947 CDADC1Q9BWV3 514 aa11.57□□□□□ -0.56
CCL4-201ENST00000613947 PRDM14Q9GZV8 571 aa11.57□□□□□ -0.56
CCL4-201ENST00000613947 LYVE1Q9Y5Y7 322 aa11.57□□□□□ -0.56
CCL4-201ENST00000613947 HECTD1Q9ULT8 2610 aa11.57□□□□□ -0.56
CCL4-201ENST00000613947 A0A075B6Q4 140 aa11.56□□□□□ -0.56
CCL4-201ENST00000613947 A0A1B0GUH1 482 aa11.56□□□□□ -0.56
CCL4-201ENST00000613947 HMX3A6NHT5 357 aa11.56□□□□□ -0.56
CCL4-201ENST00000613947 H3BML4 177 aa11.56□□□□□ -0.56
CCL4-201ENST00000613947 AP3D1O14617 1153 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms