RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 ADPRHL1Q8NDY3 354 aa10.27□□□□□ -0.77
SLIRP-212ENST00000613856 OR52L1Q8NGH7 329 aa10.27□□□□□ -0.77
SLIRP-212ENST00000613856 OR5M1Q8NGP8 315 aa10.27□□□□□ -0.77
SLIRP-212ENST00000613856 FBLIM1Q8WUP2 373 aa10.27□□□□□ -0.77
SLIRP-212ENST00000613856 SFXN2Q96NB2 322 aa10.27□□□□□ -0.77
SLIRP-212ENST00000613856 ZNF570Q96NI8 536 aa10.27□□□□□ -0.77
SLIRP-212ENST00000613856 MOGAT1Q96PD6 335 aa10.27□□□□□ -0.77
SLIRP-212ENST00000613856 GPX7Q96SL4 187 aaPredicted RBP10.27□□□□□ -0.77
SLIRP-212ENST00000613856 PRRG3Q9BZD7 231 aa10.27□□□□□ -0.77
SLIRP-212ENST00000613856 NDEL1Q9GZM8 345 aa10.27□□□□□ -0.77
SLIRP-212ENST00000613856 ZDHHC11Q9H8X9 412 aa10.27□□□□□ -0.77
SLIRP-212ENST00000613856 ACKR4Q9NPB9 350 aa10.27□□□□□ -0.77
SLIRP-212ENST00000613856 ALKBH4Q9NXW9 302 aa10.27□□□□□ -0.77
SLIRP-212ENST00000613856 MRPL39Q9NYK5 338 aaKnown RBP10.27□□□□□ -0.77
SLIRP-212ENST00000613856 OSGIN2Q9Y236 505 aa10.27□□□□□ -0.77
SLIRP-212ENST00000613856 B3GNT3Q9Y2A9 372 aa10.27□□□□□ -0.77
SLIRP-212ENST00000613856 RPH3AQ9Y2J0 694 aaPredicted RBP10.27□□□□□ -0.77
SLIRP-212ENST00000613856 CORINQ9Y5Q5 1042 aa10.27□□□□□ -0.77
SLIRP-212ENST00000613856 PKDREJQ9NTG1 2253 aa10.27□□□□□ -0.77
SLIRP-212ENST00000613856 DNAJC13O75165 2243 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 ZNF407Q9C0G0 2248 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 TRAV27A0A087WT01 109 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 LIPT2A6NK58 231 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 FAM166BA8MTA8 275 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 LRRN3E7EW58 273 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 H3BML4 177 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 HAX1O00165 279 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 DNPH1O43598 174 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 TRAPPC6AO75865 159 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 NDUFB2O95178 105 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 PMS2P2O95744 297 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 CLIC3O95833 236 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 IGFBP1P08833 259 aaPredicted RBP10.26□□□□□ -0.77
SLIRP-212ENST00000613856 IMPDH2P12268 514 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 BMP7P18075 431 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 TCEA1P23193 301 aaKnown RBP10.26□□□□□ -0.77
SLIRP-212ENST00000613856 POU1F1P28069 291 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 SLC6A6P31641 620 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 GIPRP48546 466 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 CDC42P60953 191 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 PPIAP62937 165 aaKnown RBP10.26□□□□□ -0.77
SLIRP-212ENST00000613856 TEKQ02763 1124 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 MYBPHQ13203 477 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 PDK3Q15120 406 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 TOMM20Q15388 145 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 SGCBQ16585 318 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 PGGHGQ32M88 737 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 WIPI1Q5MNZ9 446 aaPredicted RBP10.26□□□□□ -0.77
SLIRP-212ENST00000613856 RPUSD3Q6P087 351 aaKnown RBP10.26□□□□□ -0.77
SLIRP-212ENST00000613856 SLC27A4Q6P1M0 643 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 Q6ZPB1 254 aaPredicted RBP10.26□□□□□ -0.77
SLIRP-212ENST00000613856 THAP5Q7Z6K1 395 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 YRDCQ86U90 279 aaKnown RBP10.26□□□□□ -0.77
SLIRP-212ENST00000613856 CCDC71Q8IV32 467 aaPredicted RBP10.26□□□□□ -0.77
SLIRP-212ENST00000613856 DEPDC4Q8N2C3 294 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 C10orf53Q8N6V4 93 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 LRRC17Q8N6Y2 441 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 OR2T33Q8NG76 320 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 OR5J2Q8NH18 312 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 ARL5BQ96KC2 179 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 SAMD8Q96LT4 415 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 CNBD2Q96M20 576 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 MUS81Q96NY9 551 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 TAPBPLQ9BX59 468 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 TSSK6Q9BXA6 273 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 ASPNQ9BXN1 380 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 BAIAP2Q9UQB8 552 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 TRAPPC4Q9Y296 219 aa10.26□□□□□ -0.77
SLIRP-212ENST00000613856 CCDC168Q8NDH2 2452 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 BHLHE40O14503 412 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 MPZL2O60487 215 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 HIST1H2ABP04908 130 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 TFPIP10646 304 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 PEPDP12955 493 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 APEHP13798 732 aaKnown RBP10.25□□□□□ -0.77
SLIRP-212ENST00000613856 GTF2E2P29084 291 aaKnown RBP10.25□□□□□ -0.77
SLIRP-212ENST00000613856 SHC1P29353 583 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 GRPRP30550 384 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 GRK5P34947 590 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 RFC3P40938 356 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 MAGEA5P43359 124 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 TPD52P55327 224 aaPredicted RBP10.25□□□□□ -0.77
SLIRP-212ENST00000613856 ISL1P61371 349 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 GINS1Q14691 196 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 ZNF239Q16600 458 aaKnown RBP10.25□□□□□ -0.77
SLIRP-212ENST00000613856 KRT80Q6KB66 452 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 THSD4Q6ZMP0 1018 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 DPY19L2P2Q6ZN68 376 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 HIST3H2AQ7L7L0 130 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 LNX2Q8N448 690 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 LRRC75AQ8NAA5 344 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 OR4Q3Q8NH05 313 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 OR51A7Q8NH64 312 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 FAM81AQ8TBF8 368 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 TRUB1Q8WWH5 349 aaKnown RBP10.25□□□□□ -0.77
SLIRP-212ENST00000613856 HIST1H2ACQ93077 130 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 LURAP1Q96LR2 239 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 KLHL15Q96M94 604 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 OR5B2Q96R09 309 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 NR1H4Q96RI1 486 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms