RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 RGS7BPQ6MZT1 257 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 SLC35F5Q8WV83 523 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 NDUFAF3Q9BU61 184 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 NEUROD4Q9HD90 331 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 KCNIP2Q9NS61 270 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 STYXL1Q9Y6J8 313 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 SLC22A20A6NK97 555 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 MARCH11A6NNE9 402 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 MMP15P51511 669 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 OR2A2Q6IF42 318 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 PIGZQ86VD9 579 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 TMED6Q8WW62 240 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 MAL2Q969L2 176 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 SPANXA1Q9NS26 97 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 ASCC3Q8N3C0 2202 aaKnown RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 C4BPAP04003 597 aaKnown RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 TSPAN7P41732 249 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 BEX5Q5H9J7 111 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 FBXL18Q96ME1 805 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 SEMA3CQ99985 751 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 APOA2P02652 100 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 F7P08709 466 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 TAL1P17542 331 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 HIST3H3Q16695 136 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 MICBQ29980 383 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 DTD2Q96FN9 168 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 CSNK1G1Q9HCP0 422 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 FZD3Q9NPG1 666 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 LPAR3Q9UBY5 353 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 UQCR10Q9UDW1 63 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 FBXW11Q9UKB1 542 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 A6NDN8 102 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 GPR31O00270 319 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 OR1E3Q8WZA6 343 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 FUBP3Q96I24 572 aaKnown RBP eCLIP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF845Q96IR2 970 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 CTDSP1Q9GZU7 261 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 ASCL3Q9NQ33 180 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 MRPS17Q9Y2R5 130 aaKnown RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 GBAP04062 536 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 CXCR1P25024 350 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 CTHP32929 405 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 POU3F4P49335 361 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 TAS2R46P59540 309 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 Q5PR19 223 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 NOXRED1Q6NXP6 359 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 MDGA2Q7Z553 956 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 EDAQ92838 391 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 OR5M11Q96RB7 305 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 IRAK2O43187 625 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 APBA3O96018 575 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 OR5H8P0DN80 308 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 BDKRB1P46663 353 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 OR5R1Q8NH85 324 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 SLC2A12Q8TD20 617 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 ADAMTS15Q8TE58 950 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 RAB8BQ92930 207 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 NXPE3Q969Y0 559 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 RBMXL1Q96E39 390 aaKnown RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 GJD4Q96KN9 370 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 RXFP3Q9NSD7 469 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 F5P12259 2224 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 OR2AG2A6NM03 316 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 FTCDNL1E5RQL4 147 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 CNMDO75829 334 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 CD1DP15813 335 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 HIST1H1BP16401 226 aaKnown RBP4.61□□□□□ -1.67
VPS13D-213ENST00000613099 PCMT1P22061 227 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF136P52737 540 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 HMGCS1Q01581 520 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 OC90Q02509 493 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-213ENST00000613099 PRAMEF14Q5SWL7 426 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 PAQR3Q6TCH7 311 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 GLDNQ6ZMI3 551 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-213ENST00000613099 SPRYD4Q8WW59 207 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-213ENST00000613099 TAAR9Q96RI9 348 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 DNAJC13O75165 2243 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF320A2RRD8 509 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 VEGFDO43915 354 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 CRHP06850 196 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 NUBP1P53384 320 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 SELENOWP63302 87 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 LAMTOR4Q0VGL1 99 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 OR4D1Q15615 310 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 TXNDC8Q6A555 127 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 CPNE8Q86YQ8 564 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 ZDHHC14Q8IZN3 488 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 CXorf58Q96LI9 332 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 GPR78Q96P69 363 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 RNF150Q9ULK6 438 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 MRPS33Q9Y291 106 aaKnown RBP4.61□□□□□ -1.67
VPS13D-213ENST00000613099 M0R2Z0 102 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 GPR1P46091 355 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 DEGS2Q6QHC5 323 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 Q6ZTK2 550 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF547Q8IVP9 402 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 FAM24BQ8N5W8 94 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 TCRBV16S1A1N1A0A5B0 115 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 H7BY64 318 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 FZD9O00144 591 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms