RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 MED25Q71SY5 747 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 GPR155Q7Z3F1 870 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 MSRB3Q8IXL7 192 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 C9orf62Q8N4C0 152 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF454Q8N9F8 522 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 OPALINQ96PE5 141 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 OCIAD1Q9NX40 245 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 GRHPRQ9UBQ7 328 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 DAPP1Q9UN19 280 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 EXO1Q9UQ84 846 aaKnown RBP9.99□□□□□ -0.81
FAM3A-221ENST00000612856 VSTM2BA6NLU5 285 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 STK17BO94768 372 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 ECDO95905 644 aaPredicted RBP9.99□□□□□ -0.81
FAM3A-221ENST00000612856 EFEMP2O95967 443 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 TFP02787 698 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 CD22P20273 847 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 PSMA6P60900 246 aaKnown RBP9.99□□□□□ -0.81
FAM3A-221ENST00000612856 RUNX2Q13950 521 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 OR7A5Q15622 319 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 LRRC37A5PQ49AS3 106 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 DCST2Q5T1A1 773 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 RBM45Q8IUH3 476 aaKnown RBP9.99□□□□□ -0.81
FAM3A-221ENST00000612856 TNFAIP8L1Q8WVP5 186 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 TM9SF4Q92544 642 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 MS4A4EQ96PG1 132 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 CPPED1Q9BRF8 314 aaPredicted RBP9.99□□□□□ -0.81
FAM3A-221ENST00000612856 LIN7BQ9HAP6 207 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 HHATLQ9HCP6 504 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF226Q9NYT6 803 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 SLC7A7Q9UM01 511 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF175Q9Y473 711 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 CSNK1G3Q9Y6M4 447 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 TRIOO75962 3097 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 ESPL1Q14674 2120 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 H7C1C5 153 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 P2RX6O15547 441 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 KLK8O60259 260 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 RAB3AP20336 220 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 CHMP24386 653 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 LCN6P62502 163 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 GPR176Q14439 515 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF169Q14929 603 aaPredicted RBP9.99□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF385BQ569K4 471 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 FAM198BQ6UWH4 519 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 RPTNQ6XPR3 784 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 RPS19BP1Q86WX3 136 aaKnown RBP9.99□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF100Q8IYN0 542 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF676Q8N7Q3 588 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 BAHD1Q8TBE0 780 aaPredicted RBP9.99□□□□□ -0.81
FAM3A-221ENST00000612856 PMM1Q92871 262 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 BRF2Q9HAW0 419 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 BTNL2Q9UIR0 455 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 PPT2Q9UMR5 302 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 NTNG1Q9Y2I2 539 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 TRAV27A0A087WT01 109 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 SLC43A1O75387 559 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 CFDP00746 253 aaPredicted RBP9.99□□□□□ -0.81
FAM3A-221ENST00000612856 MFSD13AQ14CX5 517 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 TRAM2Q15035 370 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 LRFN4Q6PJG9 635 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 YRDCQ86U90 279 aaKnown RBP9.99□□□□□ -0.81
FAM3A-221ENST00000612856 ADAD1Q96M93 576 aaKnown RBP9.99□□□□□ -0.81
FAM3A-221ENST00000612856 BCL2L14Q9BZR8 327 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF436Q9C0F3 470 aaPredicted RBP9.99□□□□□ -0.81
FAM3A-221ENST00000612856 DEFB127Q9H1M4 99 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 B3GALT1Q9Y5Z6 326 aa9.99□□□□□ -0.81
FAM3A-221ENST00000612856 CHD9Q3L8U1 2897 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 RRP8O43159 456 aaKnown RBP9.98□□□□□ -0.81
FAM3A-221ENST00000612856 TXNL1O43396 289 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 UGDHO60701 494 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 PPM1BO75688 479 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 WNT1P04628 370 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 SCG5P05408 212 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 FOSL1P15407 271 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 SNU13P55769 128 aaKnown RBP9.98□□□□□ -0.81
FAM3A-221ENST00000612856 TNFRSF17Q02223 184 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 ZNF91Q05481 1191 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 GAB1Q13480 694 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 INSL4Q14641 139 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 NLRC3Q7RTR2 1065 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 TMPRSS7Q7RTY8 843 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 MARCH3Q86UD3 253 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 GPALPP1Q8IXQ4 340 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 PDZD9Q8IXQ8 264 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 TTC9Q92623 222 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 NMNAT1Q9HAN9 279 aaPredicted RBP9.98□□□□□ -0.81
FAM3A-221ENST00000612856 CACNA1DQ01668 2161 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 ANKRD11Q6UB99 2663 aaPredicted RBP9.98□□□□□ -0.81
FAM3A-221ENST00000612856 IGHV3-64DA0A0J9YX35 117 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 METTL21EPA6NDL7 271 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 FAM25EA8MYX2 175 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 FMO6PO60774 539 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 MRPS14O60783 128 aaKnown RBP9.98□□□□□ -0.81
FAM3A-221ENST00000612856 MT-CO3P00414 261 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 GASTP01350 101 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 FURINP09958 794 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 CDH11P55287 796 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 RBBP4Q09028 425 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 MICAQ29983 383 aa9.98□□□□□ -0.81
FAM3A-221ENST00000612856 MRPL2Q5T653 305 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms