RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	MED25	Q71SY5	747 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	ADGRF3	Q8IZF5	1079 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	SIRT6	Q8N6T7	355 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	FAM3C	Q92520	227 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	MAP3K3	Q99759	626 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	PTGES2	Q9H7Z7	377 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	QPCTL	Q9NXS2	382 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	LRIT1	Q9P2V4	623 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	KLK11	Q9UBX7	282 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	FTSJ1	Q9UET6	329 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	TES	Q9UGI8	421 aa	Known RBP	12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	LSM5	Q9Y4Y9	91 aa	Known RBP	12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	ATP1B1	P05026	303 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	CSNK2A1	P68400	391 aa	Predicted RBP	12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	GK2	Q14410	553 aa	Predicted RBP	12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	MFSD13A	Q14CX5	517 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	LAIR1	Q6GTX8	287 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	OR10K2	Q6IF99	312 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	GSG1L	Q6UXU4	331 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	GLB1L2	Q8IW92	636 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	SLC35F3	Q8IY50	421 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	CSNK2A3	Q8NEV1	391 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	MFSD8	Q8NHS3	518 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	FAM174A	Q8TBP5	190 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	ZBTB8A	Q96BR9	441 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	ARHGAP9	Q9BRR9	750 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	NKX2-4	Q9H2Z4	354 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	HRH4	Q9H3N8	390 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	NIPAL2	Q9H841	368 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	SLC2A4RG	Q9NR83	387 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	DAPP1	Q9UN19	280 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	EXO1	Q9UQ84	846 aa	Known RBP	12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	GLI4	P10075	376 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	CRYBB2	P43320	205 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	TPBG	Q13641	420 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	ZNF77	Q15935	545 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	ZNF793	Q6ZN11	406 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	GPR155	Q7Z3F1	870 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	ZNF436	Q9C0F3	470 aa	Predicted RBP	12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	SLC38A1	Q9H2H9	487 aa		12.78	□□□□□ -0.36
MUC1-223	ENST00000611571	TRBV5-3	A0A0A0MS03	114 aa		12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	C1QB	P02746	253 aa		12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	AGTR1	P30556	359 aa		12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	FAM69A	Q5T7M9	428 aa		12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	ZNF585A	Q6P3V2	769 aa		12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	ARSK	Q6UWY0	536 aa		12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	ZNF454	Q8N9F8	522 aa		12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	C3orf49	Q96BT1	292 aa		12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	KCTD12	Q96CX2	325 aa	Known RBP	12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	PSD2	Q9BQI7	771 aa		12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	URM1	Q9BTM9	101 aa	Known RBP	12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	UBQLN4	Q9NRR5	601 aa		12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	MED17	Q9NVC6	651 aa		12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	NCDN	Q9UBB6	729 aa		12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	ERCC1	P07992	297 aa	Predicted RBP	12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	NID1	P14543	1247 aa		12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	TRHR	P34981	398 aa	Predicted RBP	12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	SLC6A19	Q695T7	634 aa		12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	OR51S1	Q8NGJ8	323 aa		12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	RSC1A1	Q92681	617 aa		12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	C20orf85	Q9H1P6	137 aa		12.77	□□□□□ -0.36
MUC1-223	ENST00000611571	AKAP6	Q13023	2319 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	TP53	P04637	393 aa	Predicted RBP	12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	LIMS3	P0CW19	117 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	LIMS4	P0CW20	117 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	GABRB1	P18505	474 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	GLYATL3	Q5SZD4	288 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	ADAMTSL4	Q6UY14	1074 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	RHOU	Q7L0Q8	258 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	ABI3BP	Q7Z7G0	1075 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	OR4Q3	Q8NH05	313 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	OR5B2	Q96R09	309 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	SELENOI	Q9C0D9	397 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	CIB4	A0PJX0	185 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	FFAR1	O14842	300 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	PRAF2	O60831	178 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	HERV-K104	P61576	105 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	NFATC4	Q14934	902 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	PM20D2	Q8IYS1	436 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	RNF113B	Q8IZP6	322 aa	Known RBP	12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	FCRL1	Q96LA6	429 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	SCGB3A2	Q96PL1	93 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	HHLA2	Q9UM44	414 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	ICK	Q9UPZ9	632 aa		12.77	□□□□□ -0.37
MUC1-223	ENST00000611571	FADS1	O60427	444 aa		12.76	□□□□□ -0.37
MUC1-223	ENST00000611571	ZNF780A	O75290	641 aa	Predicted RBP	12.76	□□□□□ -0.37
MUC1-223	ENST00000611571	PNMT	P11086	282 aa		12.76	□□□□□ -0.37
MUC1-223	ENST00000611571	GNRHR	P30968	328 aa		12.76	□□□□□ -0.37
MUC1-223	ENST00000611571	ZFP36L2	P47974	494 aa	Known RBP	12.76	□□□□□ -0.37
MUC1-223	ENST00000611571	BTG2	P78543	158 aa		12.76	□□□□□ -0.37
MUC1-223	ENST00000611571	KCNAB1	Q14722	419 aa		12.76	□□□□□ -0.37
MUC1-223	ENST00000611571	NIPAL3	Q6P499	406 aa		12.76	□□□□□ -0.37
MUC1-223	ENST00000611571	CREB3L2	Q70SY1	520 aa		12.76	□□□□□ -0.37
MUC1-223	ENST00000611571	STEAP2	Q8NFT2	490 aa		12.76	□□□□□ -0.37
MUC1-223	ENST00000611571	OR4N2	Q8NGD1	307 aa		12.76	□□□□□ -0.37
MUC1-223	ENST00000611571	ELP5	Q8TE02	316 aa		12.76	□□□□□ -0.37
MUC1-223	ENST00000611571	SPACA5	Q96QH8	159 aa		12.76	□□□□□ -0.37
MUC1-223	ENST00000611571	SLC52A3	Q9NQ40	469 aa		12.76	□□□□□ -0.37
MUC1-223	ENST00000611571	C20orf141	Q9NUB4	165 aa		12.76	□□□□□ -0.37
MUC1-223	ENST00000611571	FBXO34	Q9NWN3	711 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms