RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	SDHD	O14521	159 aa		18.19	■□□□□ 0.5
NECAB3-222	ENST00000607805	DAO	P14920	347 aa		18.19	■□□□□ 0.5
NECAB3-222	ENST00000607805	CBR1	P16152	277 aa		18.19	■□□□□ 0.5
NECAB3-222	ENST00000607805	THBS4	P35443	961 aa		18.19	■□□□□ 0.5
NECAB3-222	ENST00000607805	LIN52	Q52LA3	116 aa		18.19	■□□□□ 0.5
NECAB3-222	ENST00000607805	VHLL	Q6RSH7	139 aa		18.19	■□□□□ 0.5
NECAB3-222	ENST00000607805	KIRREL3	Q8IZU9	778 aa		18.19	■□□□□ 0.5
NECAB3-222	ENST00000607805	ZCCHC24	Q8N2G6	241 aa	Known RBP	18.19	■□□□□ 0.5
NECAB3-222	ENST00000607805	ZNF786	Q8N393	782 aa		18.19	■□□□□ 0.5
NECAB3-222	ENST00000607805	CADM2	Q8N3J6	435 aa		18.19	■□□□□ 0.5
NECAB3-222	ENST00000607805	MFSD8	Q8NHS3	518 aa		18.19	■□□□□ 0.5
NECAB3-222	ENST00000607805	NEU4	Q8WWR8	484 aa	Predicted RBP	18.19	■□□□□ 0.5
NECAB3-222	ENST00000607805	SSU72	Q9NP77	194 aa	Known RBP	18.19	■□□□□ 0.5
NECAB3-222	ENST00000607805	PNPO	Q9NVS9	261 aa		18.19	■□□□□ 0.5
NECAB3-222	ENST00000607805	B3GAT1	Q9P2W7	334 aa		18.19	■□□□□ 0.5
NECAB3-222	ENST00000607805	RCE1	Q9Y256	329 aa		18.19	■□□□□ 0.5
NECAB3-222	ENST00000607805	ZNF443	Q9Y2A4	671 aa	Predicted RBP	18.19	■□□□□ 0.5
NECAB3-222	ENST00000607805	IGHV2OR16-5	A0A0B4J2B6	119 aa		18.18	■□□□□ 0.5
NECAB3-222	ENST00000607805	hCG_2039718	K7EN88	272 aa		18.18	■□□□□ 0.5
NECAB3-222	ENST00000607805	KRT75	O95678	551 aa		18.18	■□□□□ 0.5
NECAB3-222	ENST00000607805	PNMT	P11086	282 aa		18.18	■□□□□ 0.5
NECAB3-222	ENST00000607805	CHN2	P52757	468 aa		18.18	■□□□□ 0.5
NECAB3-222	ENST00000607805	COPZ1	P61923	177 aa		18.18	■□□□□ 0.5
NECAB3-222	ENST00000607805	ROR2	Q01974	943 aa	Known RBP	18.18	■□□□□ 0.5
NECAB3-222	ENST00000607805	MPP2	Q14168	576 aa		18.18	■□□□□ 0.5
NECAB3-222	ENST00000607805	KDM8	Q8N371	416 aa		18.18	■□□□□ 0.5
NECAB3-222	ENST00000607805	SLC38A5	Q8WUX1	472 aa		18.18	■□□□□ 0.5
NECAB3-222	ENST00000607805	P2RX2	Q9UBL9	471 aa		18.18	■□□□□ 0.5
NECAB3-222	ENST00000607805	ETFA	P13804	333 aa		18.17	■□□□□ 0.5
NECAB3-222	ENST00000607805	NPR2	P20594	1047 aa		18.17	■□□□□ 0.5
NECAB3-222	ENST00000607805	BGN	P21810	368 aa		18.17	■□□□□ 0.5
NECAB3-222	ENST00000607805	ARF1	P84077	181 aa	Known RBP	18.17	■□□□□ 0.5
NECAB3-222	ENST00000607805	SERPINA11	Q86U17	422 aa		18.17	■□□□□ 0.5
NECAB3-222	ENST00000607805	SVOPL	Q8N434	492 aa		18.17	■□□□□ 0.5
NECAB3-222	ENST00000607805	LINC01356	Q8N9X3	169 aa		18.17	■□□□□ 0.5
NECAB3-222	ENST00000607805	ZNF837	Q96EG3	531 aa	Predicted RBP	18.17	■□□□□ 0.5
NECAB3-222	ENST00000607805	GPR35	Q9HC97	309 aa		18.17	■□□□□ 0.5
NECAB3-222	ENST00000607805	CALML5	Q9NZT1	146 aa		18.17	■□□□□ 0.5
NECAB3-222	ENST00000607805	SEC14L4	Q9UDX3	406 aa		18.17	■□□□□ 0.5
NECAB3-222	ENST00000607805	TMEFF2	Q9UIK5	374 aa	Predicted RBP	18.17	■□□□□ 0.5
NECAB3-222	ENST00000607805	TM9SF1	O15321	606 aa		18.16	■□□□□ 0.5
NECAB3-222	ENST00000607805	TCF21	O43680	179 aa		18.16	■□□□□ 0.5
NECAB3-222	ENST00000607805	CRISP3	P54108	245 aa		18.16	■□□□□ 0.5
NECAB3-222	ENST00000607805	CDH15	P55291	814 aa		18.16	■□□□□ 0.5
NECAB3-222	ENST00000607805	CLDN17	P56750	224 aa		18.16	■□□□□ 0.5
NECAB3-222	ENST00000607805	POU3F1	Q03052	451 aa	Predicted RBP	18.16	■□□□□ 0.5
NECAB3-222	ENST00000607805	GLB1L3	Q8NCI6	653 aa	Predicted RBP	18.16	■□□□□ 0.5
NECAB3-222	ENST00000607805	ANKRD27	Q96NW4	1050 aa		18.16	■□□□□ 0.5
NECAB3-222	ENST00000607805	SPATA9	Q9BWV2	254 aa		18.16	■□□□□ 0.5
NECAB3-222	ENST00000607805	AHSA1	O95433	338 aa		18.15	■□□□□ 0.5
NECAB3-222	ENST00000607805	BCHE	P06276	602 aa		18.15	■□□□□ 0.5
NECAB3-222	ENST00000607805	ZCCHC18	P0CG32	403 aa		18.15	■□□□□ 0.5
NECAB3-222	ENST00000607805	APEX1	P27695	318 aa	Known RBP	18.15	■□□□□ 0.5
NECAB3-222	ENST00000607805	ARR3	P36575	388 aa		18.15	■□□□□ 0.5
NECAB3-222	ENST00000607805	LARS2	Q15031	903 aa	Known RBP	18.15	■□□□□ 0.5
NECAB3-222	ENST00000607805	TRIP10	Q15642	601 aa		18.15	■□□□□ 0.5
NECAB3-222	ENST00000607805	MSMP	Q1L6U9	139 aa		18.15	■□□□□ 0.5
NECAB3-222	ENST00000607805	TNFAIP8L3	Q5GJ75	292 aa		18.15	■□□□□ 0.5
NECAB3-222	ENST00000607805	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	18.15	■□□□□ 0.5
NECAB3-222	ENST00000607805	C6orf89	Q6UWU4	347 aa		18.15	■□□□□ 0.5
NECAB3-222	ENST00000607805	SPATA21	Q7Z572	469 aa		18.15	■□□□□ 0.5
NECAB3-222	ENST00000607805	MEX3D	Q86XN8	651 aa	Known RBP	18.15	■□□□□ 0.5
NECAB3-222	ENST00000607805	CDK20	Q8IZL9	346 aa		18.15	■□□□□ 0.5
NECAB3-222	ENST00000607805	SLC35B4	Q969S0	331 aa		18.15	■□□□□ 0.5
NECAB3-222	ENST00000607805	KTI12	Q96EK9	354 aa	Predicted RBP	18.15	■□□□□ 0.5
NECAB3-222	ENST00000607805	RSPO3	Q9BXY4	272 aa	Predicted RBP	18.15	■□□□□ 0.5
NECAB3-222	ENST00000607805	B3GNT2	Q9NY97	397 aa		18.15	■□□□□ 0.5
NECAB3-222	ENST00000607805	MEGF8	Q7Z7M0	2845 aa		18.15	■□□□□ 0.5
NECAB3-222	ENST00000607805		A0A0G2JPF8	293 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	HNRNPCL2	B2RXH8	293 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	HNRNPCL3	B7ZW38	293 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	RFXANK	O14593	260 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	HNRNPCL1	O60812	293 aa	Known RBP	18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	HNRNPCL4	P0DMR1	293 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	ZNF43	P17038	809 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	ITGA2	P17301	1181 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	DSTN	P60981	165 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	BST1	Q10588	318 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	STX3	Q13277	289 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	ADRM1	Q16186	407 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	TMEM123	Q8N131	208 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	UBASH3B	Q8TF42	649 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	CKAP2	Q8WWK9	683 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	SLC25A36	Q96CQ1	311 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	TMEM19	Q96HH6	336 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	ZNF75A	Q96N20	296 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	OXGR1	Q96P68	337 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	SNX18	Q96RF0	628 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	TPT1P8	Q9HAU6	139 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	NOX3	Q9HBY0	568 aa		18.14	■□□□□ 0.49
NECAB3-222	ENST00000607805	TRRAP	Q9Y4A5	3859 aa		18.13	■□□□□ 0.49
NECAB3-222	ENST00000607805	ARHGAP32	A7KAX9	2087 aa		18.13	■□□□□ 0.49
NECAB3-222	ENST00000607805	LOC102725191	A0A1B0GVB3	256 aa		18.13	■□□□□ 0.49
NECAB3-222	ENST00000607805	SLC43A1	O75387	559 aa		18.13	■□□□□ 0.49
NECAB3-222	ENST00000607805	IL6	P05231	212 aa		18.13	■□□□□ 0.49
NECAB3-222	ENST00000607805	NCF2	P19878	526 aa	Predicted RBP	18.13	■□□□□ 0.49
NECAB3-222	ENST00000607805	EPHA3	P29320	983 aa		18.13	■□□□□ 0.49
NECAB3-222	ENST00000607805	RPS5	P46782	204 aa	Known RBP	18.13	■□□□□ 0.49
NECAB3-222	ENST00000607805	DVL1P1	P54792	670 aa	Predicted RBP	18.13	■□□□□ 0.49
NECAB3-222	ENST00000607805	CEACAM16	Q2WEN9	425 aa		18.13	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms