RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 YLPM1P49750 1951 aaKnown RBP6.64□□□□□ -1.35
CUX1-219ENST00000606749 RTTNQ86VV8 2226 aa6.64□□□□□ -1.35
CUX1-219ENST00000606749 A0A096LPE4 126 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 LOC102725191A0A1B0GVB3 256 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 A0A1B0GWA3 101 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 A0A1W2PPZ6 126 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 C5orf58C9J3I9 102 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 MS4A18H0YCH9 400 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 RPL36A-HNRNPH2H7BZ11 118 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 OR2T1O43869 369 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 TPST1O60507 370 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 IFNA2P01563 188 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 IGLV1-44P01699 117 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 CRYAAP02489 173 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 CSF3P09919 207 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 ARAFP10398 606 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 USF1P22415 310 aaPredicted RBP6.63□□□□□ -1.35
CUX1-219ENST00000606749 HTR2AP28223 471 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 PRKAR1BP31321 381 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 UBE2NP61088 152 aaKnown RBP6.63□□□□□ -1.35
CUX1-219ENST00000606749 STX1BP61266 288 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 LSM11P83369 360 aaKnown RBP eCLIP6.63□□□□□ -1.356e-6■■□□□ 14.5
CUX1-219ENST00000606749 ROR2Q01974 943 aaKnown RBP6.63□□□□□ -1.35
CUX1-219ENST00000606749 NAAAQ02083 359 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 MS4A18Q3C1V0 323 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 CHRFAM7AQ494W8 412 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 PAGE3Q5JUK9 113 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 LRIF1Q5T3J3 769 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 C6orf52Q5T4I8 152 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 CYB5R2Q6BCY4 276 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 REEP3Q6NUK4 255 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 PODNL1Q6PEZ8 512 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 DHRS4L2Q6PKH6 230 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 H1FNTQ75WM6 255 aaPredicted RBP6.63□□□□□ -1.35
CUX1-219ENST00000606749 NET1Q7Z628 596 aaPredicted RBP6.63□□□□□ -1.35
CUX1-219ENST00000606749 COMTD1Q86VU5 262 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 MSRB3Q8IXL7 192 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 C10orf111Q8N326 155 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 GOLGA6L1Q8N7Z2 621 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 FAM169BQ8N8A8 192 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 ANKK1Q8NFD2 765 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 NFKBIDQ8NI38 313 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 DNAJA4Q8WW22 397 aaPredicted RBP6.63□□□□□ -1.35
CUX1-219ENST00000606749 SPDL1Q96EA4 605 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 FBXO17Q96EF6 278 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 ZNF837Q96EG3 531 aaPredicted RBP6.63□□□□□ -1.35
CUX1-219ENST00000606749 C7orf26Q96N11 449 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 ZNF317Q96PQ6 595 aaPredicted RBP6.63□□□□□ -1.35
CUX1-219ENST00000606749 ALKBH3Q96Q83 286 aaPredicted RBP6.63□□□□□ -1.35
CUX1-219ENST00000606749 KCNS3Q9BQ31 491 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 EBF4Q9BQW3 602 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 KATNB1Q9BVA0 655 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 PRR14Q9BWN1 585 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 NELFAQ9H3P2 528 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 C12orf10Q9HB07 376 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 TCF7L2Q9NQB0 619 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 CA10Q9NS85 328 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 CCDC167Q9P0B6 97 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 VAPAQ9P0L0 249 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 B3GAT1Q9P2W7 334 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 RPS6KB2Q9UBS0 482 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 SEC14L4Q9UDX3 406 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 RCE1Q9Y256 329 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 GMEB1Q9Y692 573 aa6.63□□□□□ -1.35
CUX1-219ENST00000606749 PLCE1Q9P212 2302 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 IGKV1D-42A0A075B6H8 117 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 TRAV36DV7A0A075B6V5 113 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 VWC2LB2RUY7 222 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 M0R082 166 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 AIM2O14862 343 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 SLC43A1O75387 559 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 ERLIN1O75477 346 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 IGKV3-15P01624 115 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 OR4A8P0C604 315 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 CECR9P0C854 216 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 IGHV4-31P0DP07 118 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 CBR1P16152 277 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 GPX2P18283 190 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 CBLP22681 906 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 GTF2E2P29084 291 aaKnown RBP6.62□□□□□ -1.35
CUX1-219ENST00000606749 GRPRP30550 384 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 CALCRP30988 508 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 SH3BGRP55822 239 aaPredicted RBP6.62□□□□□ -1.35
CUX1-219ENST00000606749 TUBA1BP68363 451 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 TUBA4AP68366 448 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 ARF1P84077 181 aaKnown RBP6.62□□□□□ -1.35
CUX1-219ENST00000606749 CDK6Q00534 326 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 HGFACQ04756 655 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 C1DQ13901 141 aaKnown RBP6.62□□□□□ -1.35
CUX1-219ENST00000606749 ADIPOQQ15848 244 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 ADRM1Q16186 407 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 GLIPR1L2Q4G1C9 344 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 ALG10BQ5I7T1 473 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 GCNT6Q5T4J0 391 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 FAM69AQ5T7M9 428 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 AGBL2Q5U5Z8 902 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 ULK3Q6PHR2 472 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 VHLLQ6RSH7 139 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 C5orf46Q6UWT4 87 aa6.62□□□□□ -1.35
CUX1-219ENST00000606749 NHLRC1Q6VVB1 395 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms