RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 LRRC75A-AS1Q8N1F1 130 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 CIARTQ8N365 385 aaPredicted RBP10.78□□□□□ -0.68
CTSA-210ENST00000606000 TMEM171Q8WVE6 324 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 FBXW5Q969U6 566 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 RCN3Q96D15 328 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 SLC47A1Q96FL8 570 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 USB1Q9BQ65 265 aaKnown RBP10.78□□□□□ -0.68
CTSA-210ENST00000606000 TMEM27Q9HBJ8 222 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 NGBQ9NPG2 151 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 SLC17A5Q9NRA2 495 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 PRDM4Q9UKN5 801 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 RASD1Q9Y272 281 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 MAGED1Q9Y5V3 778 aaPredicted RBP10.78□□□□□ -0.68
CTSA-210ENST00000606000 CAPN7Q9Y6W3 813 aa10.78□□□□□ -0.68
CTSA-210ENST00000606000 TRIM64A6NGJ6 449 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 TRIM64BA6NI03 449 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 BBIP1A8MTZ0 92 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 AIM2O14862 343 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 TRAF3IP2O43734 574 aaPredicted RBP10.77□□□□□ -0.69
CTSA-210ENST00000606000 SHOX2O60902 331 aaPredicted RBP10.77□□□□□ -0.69
CTSA-210ENST00000606000 DANCRP0C864 163 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 MPGP29372 298 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 CDH11P55287 796 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 TUBA1BP68363 451 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 TUBA4AP68366 448 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 IL1RL1Q01638 556 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 COQ5Q5HYK3 327 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 PHYHD1Q5SRE7 291 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 SHEQ5VZ18 495 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 Q71RC1 249 aaPredicted RBP10.77□□□□□ -0.69
CTSA-210ENST00000606000 TUBA1AQ71U36 451 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 PATL1Q86TB9 770 aaKnown RBP10.77□□□□□ -0.69
CTSA-210ENST00000606000 P2RY8Q86VZ1 359 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 BHLHE22Q8NFJ8 381 aaPredicted RBP10.77□□□□□ -0.69
CTSA-210ENST00000606000 OR8J3Q8NGG0 315 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 SLC26A7Q8TE54 656 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 ZNF583Q96ND8 569 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 GSX2Q9BZM3 304 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 SELENONQ9NZV5 590 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 SLC7A7Q9UM01 511 aa10.77□□□□□ -0.69
CTSA-210ENST00000606000 MS4A18H0YCH9 400 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 KPNA4O00629 521 aaPredicted RBP10.76□□□□□ -0.69
CTSA-210ENST00000606000 CHP2O43745 196 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 OR2T1O43869 369 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 KRT33AO76009 404 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 SEC14L2O76054 403 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 ZNF432O94892 652 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 VAMP5O95183 116 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 ZNF43P17038 809 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 CD40P25942 277 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 RPS4XP62701 263 aaKnown RBP10.76□□□□□ -0.69
CTSA-210ENST00000606000 MAPRE2Q15555 327 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 MS4A18Q3C1V0 323 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 TBRG1Q3YBR2 411 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 CARD17Q5XLA6 110 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 OR7E24Q6IFN5 339 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 LINC00114Q6XXX2 140 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 CCDC80Q76M96 950 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 TREML1Q86YW5 311 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 SLC30A8Q8IWU4 369 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 C10orf53Q8N6V4 93 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 POMGNT2Q8NAT1 580 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 C1orf162Q8NEQ5 155 aaPredicted RBP10.76□□□□□ -0.69
CTSA-210ENST00000606000 OR1K1Q8NGR3 316 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 ADAMTS16Q8TE57 1224 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 SMAP2Q8WU79 429 aaPredicted RBP10.76□□□□□ -0.69
CTSA-210ENST00000606000 ZNF837Q96EG3 531 aaPredicted RBP10.76□□□□□ -0.69
CTSA-210ENST00000606000 SLC41A3Q96GZ6 507 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 OXGR1Q96P68 337 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 ECSITQ9BQ95 431 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 EMC6Q9BV81 110 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 NELFAQ9H3P2 528 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 ZNF701Q9NV72 531 aaPredicted RBP10.76□□□□□ -0.69
CTSA-210ENST00000606000 MED29Q9NX70 200 aa10.76□□□□□ -0.69
CTSA-210ENST00000606000 CISD1Q9NZ45 108 aaKnown RBP10.76□□□□□ -0.69
CTSA-210ENST00000606000 TEP1Q99973 2627 aaKnown RBP10.75□□□□□ -0.69
CTSA-210ENST00000606000 VPS13CQ709C8 3753 aa10.75□□□□□ -0.69
CTSA-210ENST00000606000 A0A096LPE4 126 aa10.75□□□□□ -0.69
CTSA-210ENST00000606000 A0A1W2PPZ6 126 aa10.75□□□□□ -0.69
CTSA-210ENST00000606000 ZNF503-AS2A6NEH8 195 aa10.75□□□□□ -0.69
CTSA-210ENST00000606000 FAM220BPB1ANY3 271 aa10.75□□□□□ -0.69
CTSA-210ENST00000606000 E7EQL1 145 aa10.75□□□□□ -0.69
CTSA-210ENST00000606000 ZNF587BE7ETH6 402 aa10.75□□□□□ -0.69
CTSA-210ENST00000606000 H7C1Q1 480 aa10.75□□□□□ -0.69
CTSA-210ENST00000606000 ARHGEF9O43307 516 aa10.75□□□□□ -0.69
CTSA-210ENST00000606000 FMO6PO60774 539 aa10.75□□□□□ -0.69
CTSA-210ENST00000606000 NDUFS7O75251 213 aa10.75□□□□□ -0.69
CTSA-210ENST00000606000 SERPINI2O75830 405 aa10.75□□□□□ -0.69
CTSA-210ENST00000606000 CD8AP01732 235 aa10.75□□□□□ -0.69
CTSA-210ENST00000606000 C8BP07358 591 aa10.75□□□□□ -0.69
CTSA-210ENST00000606000 NQO1P15559 274 aaKnown RBP10.75□□□□□ -0.69
CTSA-210ENST00000606000 SEC24CP53992 1094 aa10.75□□□□□ -0.69
CTSA-210ENST00000606000 ATP5J2P56134 94 aa10.75□□□□□ -0.69
CTSA-210ENST00000606000 ROR2Q01974 943 aaKnown RBP10.75□□□□□ -0.69
CTSA-210ENST00000606000 POU3F1Q03052 451 aaPredicted RBP10.75□□□□□ -0.69
CTSA-210ENST00000606000 C1DQ13901 141 aaKnown RBP10.75□□□□□ -0.69
CTSA-210ENST00000606000 LRRC23Q53EV4 343 aaPredicted RBP10.75□□□□□ -0.69
CTSA-210ENST00000606000 INTS11Q5TA45 600 aaKnown RBP10.75□□□□□ -0.69
CTSA-210ENST00000606000 ZNF613Q6PF04 617 aa10.75□□□□□ -0.69
CTSA-210ENST00000606000 SLC22A25Q6T423 547 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms