RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 RNF165Q6ZSG1 346 aa13.17□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 DOK3Q7L591 496 aa13.17□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 HMGN2P46Q86SG4 172 aa13.17□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 LSRQ86X29 649 aaPredicted RBP13.17□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 GPR137CQ8N3F9 429 aa13.17□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 ACMSDQ8TDX5 336 aa13.17□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 CNOT9Q92600 299 aaKnown RBP13.17□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 DVL3Q92997 716 aaPredicted RBP13.17□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 LRRC58Q96CX6 371 aa13.17□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 DUSP26Q9BV47 211 aa13.17□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 FZR1Q9UM11 496 aa13.17□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 RASD1Q9Y272 281 aa13.17□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 RNF103-CHMP3A0A140T963 221 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 ZNF503-AS2A6NEH8 195 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 RPL36A-HNRNPH2H7BZ11 118 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 SLC43A1O75387 559 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 ALX3O95076 343 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 CD79AP11912 226 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 CLDN17P56750 224 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 DNAJB13P59910 316 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 TEKQ02763 1124 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 PTGR1Q14914 329 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 MSMPQ1L6U9 139 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 CEACAM16Q2WEN9 425 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 GPAT3Q53EU6 434 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 RETREG3Q86VR2 466 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 LRP11Q86VZ4 500 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 CLEC4FQ8N1N0 589 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 CCDC63Q8NA47 563 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 SYT14Q8NB59 555 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 ROPN1LQ96C74 230 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 COQ8BQ96D53 544 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 ZG16BQ96DA0 208 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 PPP3R2Q96LZ3 170 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 CCT8L2Q96SF2 557 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 TUBB1Q9H4B7 451 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 VWFP04275 2813 aa13.16□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 CFAP73A6NFT4 308 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 GLRA3O75311 464 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 DEAF1O75398 565 aaPredicted RBP13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 SEC14L2O76054 403 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 FSHBP01225 129 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 IGHV2-5P01817 119 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 RNASE1P07998 156 aaKnown RBP13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 GUSBP08236 651 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 ZNF43P17038 809 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 MDKP21741 143 aaPredicted RBP13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 LSP1P33241 339 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 MAGEB1P43366 347 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 SELENOVP59797 346 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 CCL8P80075 99 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 GSG1Q2KHT4 349 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 ALKBH6Q3KRA9 238 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 MMEL1Q495T6 779 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 AP1ARQ63HQ0 302 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 SAXO2Q658L1 398 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 TMEM154Q6P9G4 183 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 FRRS1Q6ZNA5 592 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 EPHX4Q8IUS5 362 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 HOMEZQ8IX15 550 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 CMIPQ8IY22 773 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 KRTCAP2Q8N6L1 136 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 KIF18AQ8NI77 898 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 TIMD4Q96H15 378 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 MS4A3Q96HJ5 214 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 FMO2Q99518 471 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 MMP27Q9H306 513 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 GPR35Q9HC97 309 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 MYEF2Q9P2K5 600 aaKnown RBP13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 OPN4Q9UHM6 478 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 GPR160Q9UJ42 338 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 EMCNQ9ULC0 261 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 DNAJC15Q9Y5T4 150 aa13.15□□□□□ -0.3
NEDD8-MDP1-204ENST00000605847 CLDN25C9JDP6 229 aa13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 TPD52L2O43399 206 aaKnown RBP13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 PEX11AO75192 247 aa13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 PRPS1L1P21108 318 aa13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 GNA13Q14344 377 aa13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 GSTA3Q16772 222 aa13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 PGS1Q32NB8 556 aa13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 CCDC153Q494R4 210 aa13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 KANK2Q63ZY3 851 aa13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 TNFAIP8L2Q6P589 184 aaPredicted RBP13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 LEG1Q6P5S2 330 aa13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 C17orf107Q6ZR85 190 aa13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 MIPOL1Q8TD10 442 aa13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 SNX33Q8WV41 574 aa13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 TWIST2Q8WVJ9 160 aa13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 POP5Q969H6 163 aaKnown RBP13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 C1orf50Q9BV19 199 aa13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 KCNF1Q9H3M0 494 aa13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 NUP50Q9UKX7 468 aa13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 RCE1Q9Y256 329 aa13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 WIPI2Q9Y4P8 454 aa13.14□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 A8MVM7 634 aa13.13□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 ZNF99A8MXY4 864 aaPredicted RBP13.13□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 M0QZ24 198 aa13.13□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 FAAHO00519 579 aa13.13□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 FRS3O43559 492 aa13.13□□□□□ -0.31
NEDD8-MDP1-204ENST00000605847 KNG1P01042 644 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms