RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 ZNF474Q6S9Z5 364 aaPredicted RBP12.32□□□□□ -0.44
RNF40-212ENST00000602784 ZNF730Q6ZMV8 503 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 BEND4Q6ZU67 534 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 MBOAT2Q6ZWT7 520 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 CREB3L2Q70SY1 520 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 HIST3H2AQ7L7L0 130 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 NUFIP2Q7Z417 695 aaKnown RBP12.32□□□□□ -0.44
RNF40-212ENST00000602784 GPAT4Q86UL3 456 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 KIF18BQ86Y91 864 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 ZIC4Q8N9L1 334 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 ZNF610Q8N9Z0 462 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 OR5J2Q8NH18 312 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 HIST1H2ACQ93077 130 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 TMEM45BQ96B21 275 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 BPIFA2Q96DR5 249 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 SGTBQ96EQ0 304 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 SEPHS2Q99611 448 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 SPOCK3Q9BQ16 436 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 FUZQ9BT04 418 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 RBM24Q9BX46 236 aaKnown RBP12.32□□□□□ -0.44
RNF40-212ENST00000602784 ENKD1Q9H0I2 346 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 NPDC1Q9NQX5 325 aaPredicted RBP12.32□□□□□ -0.44
RNF40-212ENST00000602784 B3GAT1Q9P2W7 334 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 NOSIPQ9Y314 301 aaKnown RBP12.32□□□□□ -0.44
RNF40-212ENST00000602784 HCFC1P51610 2035 aa12.32□□□□□ -0.44
RNF40-212ENST00000602784 FLNBO75369 2602 aaKnown RBP12.31□□□□□ -0.44
RNF40-212ENST00000602784 ASH1LQ9NR48 2969 aaKnown RBP12.31□□□□□ -0.44
RNF40-212ENST00000602784 ADGRG4Q8IZF6 3080 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 A0A087WUU8 490 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 TCRBV3S1A0A5B6 114 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 DHRS12A0PJE2 317 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 ENO4A6NNW6 628 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 LRRN3E7EW58 273 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 MS4A18H0YCH9 400 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 KPNA4O00629 521 aaPredicted RBP12.31□□□□□ -0.44
RNF40-212ENST00000602784 MRPL33O75394 65 aaKnown RBP12.31□□□□□ -0.44
RNF40-212ENST00000602784 OR7A10O76100 309 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 DIRAS1O95057 198 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 TSPAN19P0C672 248 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 NQO1P15559 274 aaKnown RBP12.31□□□□□ -0.44
RNF40-212ENST00000602784 PTNP21246 168 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 NTF4P34130 210 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 SORDQ00796 357 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 PRKCDQ05655 676 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 PUDPQ08623 228 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 ZP4Q12836 540 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 MS4A18Q3C1V0 323 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 PODNL1Q6PEZ8 512 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 TFAP2EQ6VUC0 442 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 RRM2BQ7LG56 351 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 SLC46A3Q7Z3Q1 461 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 YTHDF3Q7Z739 585 aaKnown RBP12.31□□□□□ -0.44
RNF40-212ENST00000602784 PXKQ7Z7A4 578 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 LUZP2Q86TE4 346 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 NRMQ8IXM6 262 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 ADGRG5Q8IZF4 528 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 CDK20Q8IZL9 346 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 PFN4Q8NHR9 129 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 ZNF775Q96BV0 537 aaPredicted RBP12.31□□□□□ -0.44
RNF40-212ENST00000602784 OPN3Q9H1Y3 402 aaPredicted RBP12.31□□□□□ -0.44
RNF40-212ENST00000602784 SLC24A3Q9HC58 644 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 C20orf141Q9NUB4 165 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 SEC14L4Q9UDX3 406 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 NOX1Q9Y5S8 564 aa12.31□□□□□ -0.44
RNF40-212ENST00000602784 C19orf84I3L1E1 186 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 OR6A2O95222 327 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 GADD45GO95257 159 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 IFI30P13284 250 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 ZNF43P17038 809 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 FUT1P19526 365 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 CBLP22681 906 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 GRNP28799 593 aaKnown RBP12.3□□□□□ -0.44
RNF40-212ENST00000602784 CD79BP40259 229 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 P2RY6Q15077 328 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 ANKDD1AQ495B1 522 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 FGD3Q5JSP0 725 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 SP5Q6BEB4 398 aaPredicted RBP12.3□□□□□ -0.44
RNF40-212ENST00000602784 NHLRC1Q6VVB1 395 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 Q6ZT83 130 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 TMPRSS11FQ6ZWK6 438 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 EPHX4Q8IUS5 362 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 ZNF100Q8IYN0 542 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 LRRC17Q8N6Y2 441 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 CANT1Q8WVQ1 401 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 APH1AQ96BI3 265 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 C12orf49Q9H741 205 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 GALNT8Q9NY28 637 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 TAS2R5Q9NYW4 299 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 RCE1Q9Y256 329 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 TMEM5Q9Y2B1 443 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 TESMINQ9Y4I5 508 aa12.3□□□□□ -0.44
RNF40-212ENST00000602784 ANKHD1Q8IWZ3 2542 aaKnown RBP12.29□□□□□ -0.44
RNF40-212ENST00000602784 TRBV4-1A0A0J9YWV2 114 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 SH3PXD2BA1X283 911 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 OR6C65A6NJZ3 312 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 HPRP00739 348 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 ADORA3P0DMS8 318 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 RRM2P31350 389 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 UQCRC1P31930 480 aa12.29□□□□□ -0.44
RNF40-212ENST00000602784 SLC9A3P48764 834 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms