RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 IL1RL1Q01638 556 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 FAPQ12884 760 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 PIN1Q13526 163 aaPredicted RBP14.87□□□□□ -0.03
TRIM28-215ENST00000601150 C1DQ13901 141 aaKnown RBP14.87□□□□□ -0.03
TRIM28-215ENST00000601150 IFI44LQ53G44 452 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 SAMD4BQ5PRF9 694 aaKnown RBP14.87□□□□□ -0.03
TRIM28-215ENST00000601150 TSPO2Q5TGU0 170 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 FKBP9P1Q75LS8 142 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 WFDC8Q8IUA0 241 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 ZNF433Q8N7K0 673 aaPredicted RBP14.87□□□□□ -0.03
TRIM28-215ENST00000601150 POMGNT2Q8NAT1 580 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 GEMIN6Q8WXD5 167 aaKnown RBP14.87□□□□□ -0.03
TRIM28-215ENST00000601150 HSD17B8Q92506 261 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 NSL1Q96IY1 281 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 SLCO5A1Q9H2Y9 848 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 SLC7A10Q9NS82 523 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 MRPL39Q9NYK5 338 aaKnown RBP14.87□□□□□ -0.03
TRIM28-215ENST00000601150 B3GAT1Q9P2W7 334 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 EGFL7Q9UHF1 273 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 RPS6KA6Q9UK32 745 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 POLQO75417 2590 aa14.87□□□□□ -0.03
TRIM28-215ENST00000601150 LRRN3E7EW58 273 aa14.86□□□□□ -0.03
TRIM28-215ENST00000601150 KPNA4O00629 521 aaPredicted RBP14.86□□□□□ -0.03
TRIM28-215ENST00000601150 SIAH2O43255 324 aa14.86□□□□□ -0.03
TRIM28-215ENST00000601150 HSD17B1P14061 328 aa14.86□□□□□ -0.03
TRIM28-215ENST00000601150 DNAJA1P31689 397 aaKnown RBP14.86□□□□□ -0.03
TRIM28-215ENST00000601150 CLDN17P56750 224 aa14.86□□□□□ -0.03
TRIM28-215ENST00000601150 PMS2P3Q13401 168 aa14.86□□□□□ -0.03
TRIM28-215ENST00000601150 ZNF74Q16587 644 aa14.86□□□□□ -0.03
TRIM28-215ENST00000601150 BEX5Q5H9J7 111 aa14.86□□□□□ -0.03
TRIM28-215ENST00000601150 GLYATQ6IB77 296 aa14.86□□□□□ -0.03
TRIM28-215ENST00000601150 PIK3IP1Q96FE7 263 aa14.86□□□□□ -0.03
TRIM28-215ENST00000601150 HSH2DQ96JZ2 352 aa14.86□□□□□ -0.03
TRIM28-215ENST00000601150 PRRC1Q96M27 445 aa14.86□□□□□ -0.03
TRIM28-215ENST00000601150 CDRT15Q96T59 188 aa14.86□□□□□ -0.03
TRIM28-215ENST00000601150 AMBRA1Q9C0C7 1298 aa14.86□□□□□ -0.03
TRIM28-215ENST00000601150 TAS2R16Q9NYV7 291 aa14.86□□□□□ -0.03
TRIM28-215ENST00000601150 RCE1Q9Y256 329 aa14.86□□□□□ -0.03
TRIM28-215ENST00000601150 ABCA4P78363 2273 aa14.86□□□□□ -0.03
TRIM28-215ENST00000601150 CIB4A0PJX0 185 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 OR6C65A6NJZ3 312 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 MS4A18H0YCH9 400 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 KLF4O43474 513 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 CH25HO95992 272 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 TCN1P20061 433 aaPredicted RBP14.85□□□□□ -0.03
TRIM28-215ENST00000601150 SELENOPP49908 381 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 ST3GAL3Q11203 375 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 TAB1Q15750 504 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 STK11Q15831 433 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 MS4A18Q3C1V0 323 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 SPATS1Q496A3 300 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 NIPAL3Q6P499 406 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 ABHD12BQ7Z5M8 362 aaPredicted RBP14.85□□□□□ -0.03
TRIM28-215ENST00000601150 P2RY8Q86VZ1 359 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 NKAIN4Q8IVV8 208 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 UEVLDQ8IX04 471 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 DEFB107AQ8IZN7 70 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 FAM156AQ8NDB6 213 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 OR5J2Q8NH18 312 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 NRGNQ92686 78 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 HS6ST2Q96MM7 605 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 FKRPQ9H9S5 495 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 NGBQ9NPG2 151 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 NANSQ9NR45 359 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 CD300AQ9UGN4 299 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 MAGEL2Q9UJ55 1249 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 A4GNTQ9UNA3 340 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 EDARQ9UNE0 448 aa14.85□□□□□ -0.03
TRIM28-215ENST00000601150 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.84□□□□□ -0.03
TRIM28-215ENST00000601150 OR5H1A6NKK0 313 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 ENO4A6NNW6 628 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 B2RBV5 119 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 PDLIM1O00151 329 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 PLPP3O14495 311 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 TRAF3IP2O43734 574 aaPredicted RBP14.84□□□□□ -0.03
TRIM28-215ENST00000601150 AKAP8O43823 692 aaKnown RBP14.84□□□□□ -0.03
TRIM28-215ENST00000601150 RAD51DO75771 328 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 KRT33AO76009 404 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 OR6A2O95222 327 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 HPRP00739 348 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 MT-ND1P03886 318 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 HIST1H2ABP04908 130 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 ITGA5P08648 1049 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 YAP1P46937 504 aaKnown RBP14.84□□□□□ -0.03
TRIM28-215ENST00000601150 UGT2B15P54855 530 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 FOXG1P55316 489 aaPredicted RBP14.84□□□□□ -0.03
TRIM28-215ENST00000601150 PUDPQ08623 228 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 FXNQ16595 210 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 TIMM23BQ5SRD1 257 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 ALKBH2Q6NS38 261 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 HIST3H2AQ7L7L0 130 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 SSX8Q7RTT4 187 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 BCAS4Q8TDM0 211 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 TMEM255BQ8WV15 326 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 TMEM239Q8WW34 195 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 HIST1H2ACQ93077 130 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 MUCL1Q96DR8 90 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 PLEKHF2Q9H8W4 249 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 GORASP2Q9H8Y8 452 aa14.84□□□□□ -0.03
TRIM28-215ENST00000601150 MEPEQ9NQ76 525 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms