RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 USP22Q9UPT9 525 aa14.44□□□□□ -0.1
USE1-208ENST00000600970 WNT9BO14905 357 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 SYNGR3O43761 229 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 ZNF432O94892 652 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 TFP02787 698 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 HPXP02790 462 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 DBIP07108 87 aaKnown RBP14.43□□□□□ -0.1
USE1-208ENST00000600970 GAAP10253 952 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 SAGP10523 405 aaPredicted RBP14.43□□□□□ -0.1
USE1-208ENST00000600970 SERPINB5P36952 375 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 EVX1P49640 407 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 ARFIP2P53365 341 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 CLDN17P56750 224 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 SLC9B1Q4ZJI4 515 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 C1orf140Q5VVS0 124 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 C1orf229Q6ZS94 237 aaPredicted RBP14.43□□□□□ -0.1
USE1-208ENST00000600970 MDP1Q86V88 176 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 RNF130Q86XS8 419 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 ZNF440Q8IYI8 595 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 KDM8Q8N371 416 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 CADM2Q8N3J6 435 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 VPS37AQ8NEZ2 397 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 ANKK1Q8NFD2 765 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 IL17RDQ8NFM7 739 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 UBLCP1Q8WVY7 318 aaPredicted RBP14.43□□□□□ -0.1
USE1-208ENST00000600970 MRPL24Q96A35 216 aaKnown RBP14.43□□□□□ -0.1
USE1-208ENST00000600970 ZNF837Q96EG3 531 aaPredicted RBP14.43□□□□□ -0.1
USE1-208ENST00000600970 MRPL37Q9BZE1 423 aaKnown RBP14.43□□□□□ -0.1
USE1-208ENST00000600970 RLIMQ9NVW2 624 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 TREM2Q9NZC2 230 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 REV1Q9UBZ9 1251 aa14.43□□□□□ -0.1
USE1-208ENST00000600970 M0R233 179 aa14.42□□□□□ -0.1
USE1-208ENST00000600970 TFPTP0C1Z6 253 aa14.42□□□□□ -0.1
USE1-208ENST00000600970 TCN1P20061 433 aaPredicted RBP14.42□□□□□ -0.1
USE1-208ENST00000600970 EPHA1P21709 976 aa14.42□□□□□ -0.1
USE1-208ENST00000600970 ACHEP22303 614 aa14.42□□□□□ -0.1
USE1-208ENST00000600970 NR4A1P22736 598 aa14.42□□□□□ -0.1
USE1-208ENST00000600970 ACAA2P42765 397 aaKnown RBP14.42□□□□□ -0.1
USE1-208ENST00000600970 WBP2NLQ6ICG8 309 aa14.42□□□□□ -0.1
USE1-208ENST00000600970 OR51F2Q8NH61 342 aa14.42□□□□□ -0.1
USE1-208ENST00000600970 RDH5Q92781 318 aa14.42□□□□□ -0.1
USE1-208ENST00000600970 TESCQ96BS2 214 aa14.42□□□□□ -0.1
USE1-208ENST00000600970 PPP1R36Q96LQ0 422 aa14.42□□□□□ -0.1
USE1-208ENST00000600970 RHOXF2Q9BQY4 288 aa14.42□□□□□ -0.1
USE1-208ENST00000600970 MS4A5Q9H3V2 200 aa14.42□□□□□ -0.1
USE1-208ENST00000600970 AKTIPQ9H8T0 292 aa14.42□□□□□ -0.1
USE1-208ENST00000600970 GPR35Q9HC97 309 aa14.42□□□□□ -0.1
USE1-208ENST00000600970 PRDM4Q9UKN5 801 aa14.42□□□□□ -0.1
USE1-208ENST00000600970 CDHR4A6H8M9 788 aa14.41□□□□□ -0.1
USE1-208ENST00000600970 NPIPB7O75200 414 aa14.41□□□□□ -0.1
USE1-208ENST00000600970 SLC43A1O75387 559 aa14.41□□□□□ -0.1
USE1-208ENST00000600970 PNMTP11086 282 aa14.41□□□□□ -0.1
USE1-208ENST00000600970 ZNF43P17038 809 aa14.41□□□□□ -0.1
USE1-208ENST00000600970 CEACAM16Q2WEN9 425 aa14.41□□□□□ -0.1
USE1-208ENST00000600970 AWAT1Q58HT5 328 aa14.41□□□□□ -0.1
USE1-208ENST00000600970 SPANXN4Q5MJ08 99 aa14.41□□□□□ -0.1
USE1-208ENST00000600970 FAHD2BQ6P2I3 314 aaPredicted RBP14.41□□□□□ -0.1
USE1-208ENST00000600970 VRK2Q86Y07 508 aa14.41□□□□□ -0.1
USE1-208ENST00000600970 PEX5LQ8IYB4 626 aa14.41□□□□□ -0.1
USE1-208ENST00000600970 YIPF5Q969M3 257 aa14.41□□□□□ -0.1
USE1-208ENST00000600970 FAHD2AQ96GK7 314 aa14.41□□□□□ -0.1
USE1-208ENST00000600970 ZIM3Q96PE6 472 aa14.41□□□□□ -0.1
USE1-208ENST00000600970 ZNF275Q9NSD4 429 aaPredicted RBP14.41□□□□□ -0.1
USE1-208ENST00000600970 RCE1Q9Y256 329 aa14.41□□□□□ -0.1
USE1-208ENST00000600970 LOC105371242A0A075B767 164 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 TRAV20A0A0B4J274 112 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 FTCDNL1E5RQL4 147 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 SPAG7O75391 227 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 SEC14L2O76054 403 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 PNPP00491 289 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 AVPP01185 164 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 NR2F1P10589 423 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 ALDH3B1P43353 468 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 CAPZA2P47755 286 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 LIMS1P48059 325 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 SEC24CP53992 1094 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 TMEM33P57088 247 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 LMO4P61968 165 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 PDCD2Q16342 344 aaPredicted RBP14.4□□□□□ -0.1
USE1-208ENST00000600970 COX20Q5RI15 118 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 PRR31Q5SQ13 230 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 ZNF836Q6ZNA1 936 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 CCDC36Q8IYA8 594 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 GPR137CQ8N3F9 429 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 MFSD8Q8NHS3 518 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 STK35Q8TDR2 534 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 TCP10LQ8TDR4 215 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 SLC25A36Q96CQ1 311 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 MS4A3Q96HJ5 214 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 CCDC115Q96NT0 180 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 JMJD8Q96S16 334 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 SYT3Q9BQG1 590 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 G6PC2Q9NQR9 355 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 B3GNT2Q9NY97 397 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 SEC14L4Q9UDX3 406 aa14.4□□□□□ -0.1
USE1-208ENST00000600970 CCDC154A6NI56 674 aa14.39□□□□□ -0.11
USE1-208ENST00000600970 ZNF99A8MXY4 864 aaPredicted RBP14.39□□□□□ -0.11
USE1-208ENST00000600970 AHSA1O95433 338 aa14.39□□□□□ -0.11
USE1-208ENST00000600970 NUDT17P0C025 328 aa14.39□□□□□ -0.11
USE1-208ENST00000600970 ZNF35P13682 527 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms