RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 SCAIQ8N9R8 606 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 LRRC75AQ8NAA5 344 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 OR51G2Q8NGK0 314 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 OR5J2Q8NH18 312 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 SLC25A43Q8WUT9 341 aaPredicted RBP18.12■□□□□ 0.49
PNKP-214ENST00000600573 PTP4A1Q93096 173 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 THOC3Q96J01 351 aaKnown RBP18.12■□□□□ 0.49
PNKP-214ENST00000600573 PTDSS2Q9BVG9 487 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 HCAR1Q9BXC0 346 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 INPP5EQ9NRR6 644 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 ERVK13-1Q9NX77 482 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 STUB1Q9UNE7 303 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 SPEGQ15772 3267 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 MUC6Q6W4X9 2439 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 CBR3O75828 277 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 LIPCP11150 499 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 TGFBR1P36897 503 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 AQP2P41181 271 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 CYB561P49447 251 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 DSCR4P56555 118 aaPredicted RBP18.12■□□□□ 0.49
PNKP-214ENST00000600573 POU4F2Q12837 409 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 GLYR1Q49A26 553 aaPredicted RBP18.12■□□□□ 0.49
PNKP-214ENST00000600573 OR2G6Q5TZ20 316 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 LCN1P1Q5VSP4 162 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 ARSKQ6UWY0 536 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 ZBTB46Q86UZ6 589 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 IGFN1Q86VF2 1251 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 PHC2Q8IXK0 858 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 UFD1Q92890 307 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 BORCS5Q969J3 196 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 CENPOQ9BU64 300 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 ASCL3Q9NQ33 180 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 MRPL39Q9NYK5 338 aaKnown RBP18.12■□□□□ 0.49
PNKP-214ENST00000600573 STMN3Q9NZ72 180 aa18.12■□□□□ 0.49
PNKP-214ENST00000600573 J3QRE1 110 aa18.11■□□□□ 0.49
PNKP-214ENST00000600573 OR6A2O95222 327 aa18.11■□□□□ 0.49
PNKP-214ENST00000600573 PSMA1P25786 263 aaKnown RBP18.11■□□□□ 0.49
PNKP-214ENST00000600573 SDHAP31040 664 aa18.11■□□□□ 0.49
PNKP-214ENST00000600573 CASRP41180 1078 aa18.11■□□□□ 0.49
PNKP-214ENST00000600573 FOXF1Q12946 379 aa18.11■□□□□ 0.49
PNKP-214ENST00000600573 SLC35D3Q5M8T2 416 aa18.11■□□□□ 0.49
PNKP-214ENST00000600573 ASCL5Q7RTU5 278 aa18.11■□□□□ 0.49
PNKP-214ENST00000600573 ACBD7Q8N6N7 88 aa18.11■□□□□ 0.49
PNKP-214ENST00000600573 OR52E2Q8NGJ4 325 aa18.11■□□□□ 0.49
PNKP-214ENST00000600573 OR1J4Q8NGS1 313 aa18.11■□□□□ 0.49
PNKP-214ENST00000600573 PSMF1Q92530 271 aa18.11■□□□□ 0.49
PNKP-214ENST00000600573 KATNB1Q9BVA0 655 aa18.11■□□□□ 0.49
PNKP-214ENST00000600573 OR51V1Q9H2C8 321 aa18.11■□□□□ 0.49
PNKP-214ENST00000600573 VDAC3Q9Y277 283 aa18.11■□□□□ 0.49
PNKP-214ENST00000600573 SLC30A4O14863 429 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 GPX5O75715 221 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 CCL3P10147 92 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 HIST1H1CP16403 213 aaKnown RBP18.1■□□□□ 0.49
PNKP-214ENST00000600573 CTXN1P60606 82 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 RPL18Q07020 188 aaKnown RBP18.1■□□□□ 0.49
PNKP-214ENST00000600573 ZP4Q12836 540 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 TPBGQ13641 420 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 ABHD17BQ5VST6 288 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 LIPKQ5VXJ0 399 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 TIGD3Q6B0B8 471 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 C3orf33Q6P1S2 294 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 LHFPL3Q86UP9 236 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 CROCCP3Q8IVE0 287 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 CYB561A3Q8NBI2 242 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 CLEC1AQ8NC01 280 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 ZNF485Q8NCK3 441 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 ZNF248Q8NDW4 579 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 SDR9C7Q8NEX9 313 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 MOSPD2Q8NHP6 518 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 THAP4Q8WY91 577 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 TEAD3Q99594 435 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 ARHGAP9Q9BRR9 750 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 SLIRPQ9GZT3 109 aaKnown RBP18.1■□□□□ 0.49
PNKP-214ENST00000600573 EXOSC4Q9NPD3 245 aaKnown RBP18.1■□□□□ 0.49
PNKP-214ENST00000600573 GRHPRQ9UBQ7 328 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 IL17BQ9UHF5 180 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 CAB39Q9Y376 341 aaPredicted RBP18.1■□□□□ 0.49
PNKP-214ENST00000600573 CPAMD8Q8IZJ3 1885 aa18.1■□□□□ 0.49
PNKP-214ENST00000600573 ZC3H12DA2A288 527 aaKnown RBP18.09■□□□□ 0.49
PNKP-214ENST00000600573 C12orf71A8MTZ7 269 aa18.09■□□□□ 0.49
PNKP-214ENST00000600573 B4DXG7 233 aa18.09■□□□□ 0.49
PNKP-214ENST00000600573 AKAP8O43823 692 aaKnown RBP18.09■□□□□ 0.49
PNKP-214ENST00000600573 FZD7O75084 574 aa18.09■□□□□ 0.49
PNKP-214ENST00000600573 LIFP15018 202 aa18.09■□□□□ 0.49
PNKP-214ENST00000600573 GTF2E2P29084 291 aaKnown RBP18.09■□□□□ 0.49
PNKP-214ENST00000600573 SLC16A1P53985 500 aa18.09■□□□□ 0.49
PNKP-214ENST00000600573 RRADP55042 308 aa18.09■□□□□ 0.49
PNKP-214ENST00000600573 RPS3AP61247 264 aaKnown RBP18.09■□□□□ 0.49
PNKP-214ENST00000600573 ACTC1P68032 377 aa18.09■□□□□ 0.49
PNKP-214ENST00000600573 ACTA1P68133 377 aa18.09■□□□□ 0.49
PNKP-214ENST00000600573 ACSM1Q08AH1 577 aa18.09■□□□□ 0.49
PNKP-214ENST00000600573 SELENBP1Q13228 472 aa18.09■□□□□ 0.49
PNKP-214ENST00000600573 ZNF829Q3KNS6 432 aaPredicted RBP18.09■□□□□ 0.49
PNKP-214ENST00000600573 GXYLT1Q4G148 440 aa18.09■□□□□ 0.49
PNKP-214ENST00000600573 PRAMEF20Q5VT98 475 aa18.09■□□□□ 0.49
PNKP-214ENST00000600573 TMPRSS11AQ6ZMR5 421 aa18.09■□□□□ 0.49
PNKP-214ENST00000600573 FAM122BQ7Z309 247 aa18.09■□□□□ 0.49
PNKP-214ENST00000600573 GTPBP8Q8N3Z3 284 aaPredicted RBP18.09■□□□□ 0.49
PNKP-214ENST00000600573 TMEM99Q8N816 258 aa18.09■□□□□ 0.49
PNKP-214ENST00000600573 OR4K13Q8NH42 304 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms