RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 ANKRD34AQ69YU3 496 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 WDR88Q6ZMY6 472 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 CBLL1Q75N03 491 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 H1FNTQ75WM6 255 aaPredicted RBP14.27□□□□□ -0.13
LSM4-206ENST00000600289 BHLHA15Q7RTS1 189 aaPredicted RBP14.27□□□□□ -0.13
LSM4-206ENST00000600289 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.27□□□□□ -0.13
LSM4-206ENST00000600289 GPAT4Q86UL3 456 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 P2RY8Q86VZ1 359 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 PRIMA1Q86XR5 153 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 EPHX4Q8IUS5 362 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 PGAM4Q8N0Y7 254 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 ZNF433Q8N7K0 673 aaPredicted RBP14.27□□□□□ -0.13
LSM4-206ENST00000600289 ZNF417Q8TAU3 575 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 LZICQ8WZA0 190 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 HSD17B8Q92506 261 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 NINJ1Q92982 152 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 SLC25A36Q96CQ1 311 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 OXGR1Q96P68 337 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 ZNF385AQ96PM9 386 aaKnown RBP14.27□□□□□ -0.13
LSM4-206ENST00000600289 ZNF587Q96SQ5 575 aaPredicted RBP14.27□□□□□ -0.13
LSM4-206ENST00000600289 KCTD14Q9BQ13 255 aaPredicted RBP14.27□□□□□ -0.13
LSM4-206ENST00000600289 PRSS27Q9BQR3 290 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 AMBRA1Q9C0C7 1298 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 PLEKHF2Q9H8W4 249 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 ASB6Q9NWX5 421 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 NDE1Q9NXR1 346 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 MRPL39Q9NYK5 338 aaKnown RBP14.27□□□□□ -0.13
LSM4-206ENST00000600289 TAS2R16Q9NYV7 291 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 B3GAT1Q9P2W7 334 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 SLC7A7Q9UM01 511 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 RCE1Q9Y256 329 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 NBEAL1Q6ZS30 2694 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 STAB1Q9NY15 2570 aa14.27□□□□□ -0.13
LSM4-206ENST00000600289 KIAA1324LA8MWY0 1029 aaPredicted RBP14.26□□□□□ -0.13
LSM4-206ENST00000600289 KLF4O43474 513 aa14.26□□□□□ -0.13
LSM4-206ENST00000600289 GGT1P19440 569 aa14.26□□□□□ -0.13
LSM4-206ENST00000600289 BEX5Q5H9J7 111 aa14.26□□□□□ -0.13
LSM4-206ENST00000600289 TIMM23BQ5SRD1 257 aa14.26□□□□□ -0.13
LSM4-206ENST00000600289 TTC33Q6PID6 262 aaPredicted RBP14.26□□□□□ -0.13
LSM4-206ENST00000600289 SEZ6L2Q6UXD5 910 aa14.26□□□□□ -0.13
LSM4-206ENST00000600289 AAED1Q7RTV5 226 aa14.26□□□□□ -0.13
LSM4-206ENST00000600289 POMGNT2Q8NAT1 580 aa14.26□□□□□ -0.13
LSM4-206ENST00000600289 C1orf162Q8NEQ5 155 aaPredicted RBP14.26□□□□□ -0.13
LSM4-206ENST00000600289 SPATA3Q8NHX4 192 aa14.26□□□□□ -0.13
LSM4-206ENST00000600289 RNF217Q8TC41 542 aa14.26□□□□□ -0.13
LSM4-206ENST00000600289 BOD1Q96IK1 185 aa14.26□□□□□ -0.13
LSM4-206ENST00000600289 ASPNQ9BXN1 380 aa14.26□□□□□ -0.13
LSM4-206ENST00000600289 SLCO5A1Q9H2Y9 848 aa14.26□□□□□ -0.13
LSM4-206ENST00000600289 ARL8BQ9NVJ2 186 aa14.26□□□□□ -0.13
LSM4-206ENST00000600289 C6orf203Q9P0P8 240 aaPredicted RBP14.26□□□□□ -0.13
LSM4-206ENST00000600289 SEC14L4Q9UDX3 406 aa14.26□□□□□ -0.13
LSM4-206ENST00000600289 EDARQ9UNE0 448 aa14.26□□□□□ -0.13
LSM4-206ENST00000600289 A0A1W2PPR1 153 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 GSTA4O15217 222 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 LYZL6O75951 148 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 HSD17B1P14061 328 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 TNFRSF1BP20333 461 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 DNAJA1P31689 397 aaKnown RBP14.25□□□□□ -0.13
LSM4-206ENST00000600289 MNAT1P51948 309 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 NR1H2P55055 460 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 TAS2R41P59536 307 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 FOXD4Q12950 439 aaPredicted RBP14.25□□□□□ -0.13
LSM4-206ENST00000600289 TAB1Q15750 504 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 SPATS1Q496A3 300 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 TSPO2Q5TGU0 170 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 FBXW10Q5XX13 1052 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 P3H2Q8IVL5 708 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 UBE2J2Q8N2K1 259 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 FITM2Q8N6M3 262 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 CCDC197Q8NCU1 140 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 GEMIN6Q8WXD5 167 aaKnown RBP14.25□□□□□ -0.13
LSM4-206ENST00000600289 ZC3HAV1LQ96H79 300 aaKnown RBP14.25□□□□□ -0.13
LSM4-206ENST00000600289 TPD52L3Q96J77 140 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 PRRC1Q96M27 445 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 MOGAT1Q96PD6 335 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 LINC00470Q9BZP3 86 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 FKRPQ9H9S5 495 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 SLC7A10Q9NS82 523 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 RIMS3Q9UJD0 308 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 ADAM21Q9UKJ8 722 aa14.25□□□□□ -0.13
LSM4-206ENST00000600289 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.24□□□□□ -0.13
LSM4-206ENST00000600289 HTR3EA5X5Y0 456 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 OR5H1A6NKK0 313 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 MS4A18H0YCH9 400 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 TRAF3IP2O43734 574 aaPredicted RBP14.24□□□□□ -0.13
LSM4-206ENST00000600289 AKAP8O43823 692 aaKnown RBP14.24□□□□□ -0.13
LSM4-206ENST00000600289 ZNF432O94892 652 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 IGHV3-9P01782 118 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 ITGA5P08648 1049 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 ZNF43P17038 809 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 OR1E2P47887 323 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 IST1P53990 364 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 FAPQ12884 760 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 TSC22D1Q15714 1073 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 ZNF74Q16587 644 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 MS4A18Q3C1V0 323 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 IFI44LQ53G44 452 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 OR7E24Q6IFN5 339 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 C16orf89Q6UX73 402 aa14.24□□□□□ -0.13
LSM4-206ENST00000600289 PAMR1Q6UXH9 720 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 296.5 ms