RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 C10orf111Q8N326 155 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 ADPRHL1Q8NDY3 354 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 HIPK4Q8NE63 616 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 OR1K1Q8NGR3 316 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 TSPEARQ8WU66 669 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 SLC47A1Q96FL8 570 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 CACNG6Q9BXT2 260 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 SELENONQ9NZV5 590 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.82□□□□□ -0.2
VRK3-221ENST00000600284 GDF2Q9UK05 429 aaPredicted RBP13.82□□□□□ -0.2
VRK3-221ENST00000600284 TRIM33Q9UPN9 1127 aa13.82□□□□□ -0.2
VRK3-221ENST00000600284 TRAV36DV7A0A075B6V5 113 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 ARPC4-TTLL3A0A0A6YYG9 625 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 H7C417 338 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 TPST1O60507 370 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 ZNF432O94892 652 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 CDH2P19022 906 aaPredicted RBP13.81□□□□□ -0.2
VRK3-221ENST00000600284 HTR2AP28223 471 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 PCSK6P29122 969 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 NCALDP61601 193 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 CHRNB3Q05901 458 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 RBBP4Q09028 425 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 RAB35Q15286 201 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 TBRG1Q3YBR2 411 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 HIKESHIQ53FT3 197 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 ANKRD16Q6P6B7 361 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 B3GLCTQ6Y288 498 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 H1FNTQ75WM6 255 aaPredicted RBP13.81□□□□□ -0.2
VRK3-221ENST00000600284 DPP10Q8N608 796 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 FAM169BQ8N8A8 192 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 BCL2L2Q92843 193 aaPredicted RBP13.81□□□□□ -0.2
VRK3-221ENST00000600284 TAAR8Q969N4 342 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 CPPED1Q9BRF8 314 aaPredicted RBP13.81□□□□□ -0.2
VRK3-221ENST00000600284 SIKE1Q9BRV8 207 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 RHNO1Q9BSD3 238 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 IKZF5Q9H5V7 419 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 TMEM27Q9HBJ8 222 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 ARGLU1Q9NWB6 273 aaPredicted RBP13.81□□□□□ -0.2
VRK3-221ENST00000600284 SLC13A4Q9UKG4 626 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 NDUFAF1Q9Y375 327 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 ATP23Q9Y6H3 246 aa13.81□□□□□ -0.2
VRK3-221ENST00000600284 A0A087WUJ7 227 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 INAFM1C9JVW0 142 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 AKAP8O43823 692 aaKnown RBP13.8□□□□□ -0.2
VRK3-221ENST00000600284 SSX4O60224 188 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 SLC43A1O75387 559 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 UPK3AO75631 287 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 MFN2O95140 757 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 LGI1O95970 557 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 PTNP21246 168 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 NUDT6P53370 316 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 CLDN17P56750 224 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 RGS8P57771 180 aaPredicted RBP13.8□□□□□ -0.2
VRK3-221ENST00000600284 UBE2NP61088 152 aaKnown RBP13.8□□□□□ -0.2
VRK3-221ENST00000600284 KRTAP1-1Q07627 177 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 GLIPR1L2Q4G1C9 344 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 SWT1Q5T5J6 900 aaKnown RBP13.8□□□□□ -0.2
VRK3-221ENST00000600284 HMBOX1Q6NT76 420 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 COMTD1Q86VU5 262 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 ARMC8Q8IUR7 673 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 KDM8Q8N371 416 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 C11orf65Q8NCR3 313 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 OR10H5Q8NGA6 315 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 ALKBH3Q96Q83 286 aaPredicted RBP13.8□□□□□ -0.2
VRK3-221ENST00000600284 SLC38A2Q96QD8 506 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 EPYCQ99645 322 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 KATNB1Q9BVA0 655 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 ZNF385DQ9H6B1 395 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 B3GAT1Q9P2W7 334 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 CRNNQ9UBG3 495 aaPredicted RBP13.8□□□□□ -0.2
VRK3-221ENST00000600284 ANGPT4Q9Y264 503 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 CORINQ9Y5Q5 1042 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 PMF1-BGLAPU3KQ54 211 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 ZANQ9Y493 2812 aa13.8□□□□□ -0.2
VRK3-221ENST00000600284 PLCE1Q9P212 2302 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 IGKV1D-42A0A075B6H8 117 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 A0A0B4J2E0 115 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 A0A1B0GX12 115 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 M0R082 166 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 FMO6PO60774 539 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 TP53P04637 393 aaPredicted RBP13.79□□□□□ -0.2
VRK3-221ENST00000600284 C8BP07358 591 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 GRPRP30550 384 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 PCBP3P57721 371 aaKnown RBP13.79□□□□□ -0.2
VRK3-221ENST00000600284 ROR2Q01974 943 aaKnown RBP13.79□□□□□ -0.2
VRK3-221ENST00000600284 DMTNQ08495 405 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 C1DQ13901 141 aaKnown RBP13.79□□□□□ -0.2
VRK3-221ENST00000600284 OR1Q1Q15612 314 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 METTL21CQ5VZV1 264 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 LINGO2Q7L985 606 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 DHDDSQ86SQ9 333 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 RANBP3LQ86VV4 465 aaPredicted RBP13.79□□□□□ -0.2
VRK3-221ENST00000600284 SLC30A8Q8IWU4 369 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 PIK3C3Q8NEB9 887 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 ZNF417Q8TAU3 575 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 SLC41A3Q96GZ6 507 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 ANKRD27Q96NW4 1050 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 ZNF587Q96SQ5 575 aaPredicted RBP13.79□□□□□ -0.2
VRK3-221ENST00000600284 CGREF1Q99674 301 aa13.79□□□□□ -0.2
VRK3-221ENST00000600284 KLHL14Q9P2G3 628 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms