RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 SLC25A36Q96CQ1 311 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 LRFN5Q96NI6 719 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 GFM1Q96RP9 751 aaKnown RBP13.12□□□□□ -0.31
VRK3-217ENST00000599538 COQ7Q99807 217 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 CRB3Q9BUF7 120 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 SRA1Q9HD15 236 aaKnown RBP13.12□□□□□ -0.31
VRK3-217ENST00000599538 TIGARQ9NQ88 270 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 TAS2R5Q9NYW4 299 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 POLHQ9Y253 713 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 A0A1W2PRG6 482 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 C11orf98E9PRG8 122 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 IDH3BO43837 385 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 OR2T7P0C7T2 308 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 GP1BBP13224 206 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 CCL4P13236 92 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 SDHAP31040 664 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 ACTC1P68032 377 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 ACTA1P68133 377 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 CBFBQ13951 182 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 ISXQ2M1V0 245 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.12□□□□□ -0.31
VRK3-217ENST00000599538 GLYR1Q49A26 553 aaPredicted RBP13.12□□□□□ -0.31
VRK3-217ENST00000599538 OTPQ5XKR4 325 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 DMKNQ6E0U4 476 aaPredicted RBP13.12□□□□□ -0.31
VRK3-217ENST00000599538 GPALPP1Q8IXQ4 340 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 OR8H2Q8N162 312 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 OR2T27Q8NH04 317 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 ZC3H10Q96K80 434 aaKnown RBP13.12□□□□□ -0.31
VRK3-217ENST00000599538 ATF6BQ99941 703 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 ALG12Q9BV10 488 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 SRRQ9GZT4 340 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 C12orf10Q9HB07 376 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 NOX1Q9Y5S8 564 aa13.12□□□□□ -0.31
VRK3-217ENST00000599538 CACNA1CQ13936 2221 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 CPAMD8Q8IZJ3 1885 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 TMED7-TICAM2A0A0A6YYA0 188 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 TEX51A0A1B0GUA7 166 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 D6RAR5 112 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 SUSD5O60279 629 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 GPANK1O95872 356 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 PSMB10P40306 273 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 NRG3P56975 720 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 TCEAL6Q6IPX3 200 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 GDPD3Q7L5L3 318 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 CPEB2Q7Z5Q1 589 aaKnown RBP13.11□□□□□ -0.31
VRK3-217ENST00000599538 JAZF1Q86VZ6 243 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 POMGNT2Q8NAT1 580 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 DRAXINQ8NBI3 349 aaPredicted RBP13.11□□□□□ -0.31
VRK3-217ENST00000599538 ABHD4Q8TB40 342 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 GHSRQ92847 366 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 TCEAL3Q969E4 200 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 DIRAS2Q96HU8 199 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 FKRPQ9H9S5 495 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 ACOXLQ9NUZ1 547 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 TAS2R10Q9NYW0 307 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 TBC1D24Q9ULP9 559 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 TRAPPC4Q9Y296 219 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 TMED7Q9Y3B3 224 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 FREM2Q5SZK8 3169 aa13.11□□□□□ -0.31
VRK3-217ENST00000599538 A0A087WV48 116 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 A0A1W2PPK0 400 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 HPGDSO60760 199 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 NPIPB7O75200 414 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 SC5DO75845 299 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 GLCEO94923 617 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 PLGP00747 810 aaPredicted RBP13.1□□□□□ -0.31
VRK3-217ENST00000599538 GAAP10253 952 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 IL11P20809 199 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 RPS27P42677 84 aaKnown RBP13.1□□□□□ -0.31
VRK3-217ENST00000599538 OR10A3P58181 314 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 CDONQ4KMG0 1287 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 MRPL14Q6P1L8 145 aaKnown RBP13.1□□□□□ -0.31
VRK3-217ENST00000599538 FAM131AQ6UXB0 335 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 OR6V1Q8N148 313 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 BMPERQ8N8U9 685 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 MINDY2Q8NBR6 621 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 SMAD5Q99717 465 aaKnown RBP13.1□□□□□ -0.31
VRK3-217ENST00000599538 NCDNQ9UBB6 729 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 GRHPRQ9UBQ7 328 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 GNG8Q9UK08 70 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 PPIEQ9UNP9 301 aaKnown RBP13.1□□□□□ -0.31
VRK3-217ENST00000599538 KLHDC2Q9Y2U9 406 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 MED12Q93074 2177 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 TRAV36DV7A0A075B6V5 113 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 HTR3EA5X5Y0 456 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 TVP23AA6NH52 213 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 NTN3O00634 580 aaPredicted RBP13.1□□□□□ -0.31
VRK3-217ENST00000599538 CPNE3O75131 537 aaKnown RBP13.1□□□□□ -0.31
VRK3-217ENST00000599538 TXNDC12O95881 172 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 ONECUT2O95948 504 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 APEHP13798 732 aaKnown RBP13.1□□□□□ -0.31
VRK3-217ENST00000599538 GALP22466 123 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 LGALS3BPQ08380 585 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 KRR1Q13601 381 aaKnown RBP13.1□□□□□ -0.31
VRK3-217ENST00000599538 DDI2Q5TDH0 399 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 LCN1P1Q5VSP4 162 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 CEACAM19Q7Z692 300 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 NUBPLQ8TB37 319 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 SNX33Q8WV41 574 aa13.1□□□□□ -0.31
VRK3-217ENST00000599538 HGDQ93099 445 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms