RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 TUBA1BP68363 451 aa18.35■□□□□ 0.53
PNKP-212ENST00000599454 TUBA4AP68366 448 aa18.35■□□□□ 0.53
PNKP-212ENST00000599454 ROR2Q01974 943 aaKnown RBP18.35■□□□□ 0.53
PNKP-212ENST00000599454 STX3Q13277 289 aa18.35■□□□□ 0.53
PNKP-212ENST00000599454 TUBA1AQ71U36 451 aa18.35■□□□□ 0.53
PNKP-212ENST00000599454 DOK1Q99704 481 aa18.35■□□□□ 0.53
PNKP-212ENST00000599454 SVEP1Q4LDE5 3571 aa18.34■□□□□ 0.53
PNKP-212ENST00000599454 TCF21O43680 179 aa18.34■□□□□ 0.53
PNKP-212ENST00000599454 IL6P05231 212 aa18.34■□□□□ 0.53
PNKP-212ENST00000599454 ZNF43P17038 809 aa18.34■□□□□ 0.53
PNKP-212ENST00000599454 GTF2E2P29084 291 aaKnown RBP18.34■□□□□ 0.53
PNKP-212ENST00000599454 ARR3P36575 388 aa18.34■□□□□ 0.53
PNKP-212ENST00000599454 HGFACQ04756 655 aa18.34■□□□□ 0.53
PNKP-212ENST00000599454 KRT71Q3SY84 523 aa18.34■□□□□ 0.53
PNKP-212ENST00000599454 CCDC36Q8IYA8 594 aa18.34■□□□□ 0.53
PNKP-212ENST00000599454 ZNF786Q8N393 782 aa18.34■□□□□ 0.53
PNKP-212ENST00000599454 LINC01356Q8N9X3 169 aa18.34■□□□□ 0.53
PNKP-212ENST00000599454 IL17RDQ8NFM7 739 aa18.34■□□□□ 0.53
PNKP-212ENST00000599454 SLC35B4Q969S0 331 aa18.34■□□□□ 0.53
PNKP-212ENST00000599454 SOX7Q9BT81 388 aa18.34■□□□□ 0.53
PNKP-212ENST00000599454 SPATA9Q9BWV2 254 aa18.34■□□□□ 0.53
PNKP-212ENST00000599454 THUMPD1Q9NXG2 353 aaKnown RBP18.34■□□□□ 0.53
PNKP-212ENST00000599454 IFT52Q9Y366 437 aa18.34■□□□□ 0.53
PNKP-212ENST00000599454 GPR45Q9Y5Y3 372 aa18.34■□□□□ 0.53
PNKP-212ENST00000599454 LRP5LA4QPB2 252 aa18.33■□□□□ 0.52
PNKP-212ENST00000599454 FTCDNL1E5RQL4 147 aa18.33■□□□□ 0.52
PNKP-212ENST00000599454 SDHDO14521 159 aa18.33■□□□□ 0.52
PNKP-212ENST00000599454 RGS16O15492 202 aaPredicted RBP18.33■□□□□ 0.52
PNKP-212ENST00000599454 SLC43A1O75387 559 aa18.33■□□□□ 0.52
PNKP-212ENST00000599454 ZNF432O94892 652 aa18.33■□□□□ 0.52
PNKP-212ENST00000599454 BCHEP06276 602 aa18.33■□□□□ 0.52
PNKP-212ENST00000599454 PNMTP11086 282 aa18.33■□□□□ 0.52
PNKP-212ENST00000599454 BGNP21810 368 aa18.33■□□□□ 0.52
PNKP-212ENST00000599454 THBS4P35443 961 aa18.33■□□□□ 0.52
PNKP-212ENST00000599454 MVDP53602 400 aa18.33■□□□□ 0.52
PNKP-212ENST00000599454 CLDN17P56750 224 aa18.33■□□□□ 0.52
PNKP-212ENST00000599454 DSTNP60981 165 aa18.33■□□□□ 0.52
PNKP-212ENST00000599454 CLIP4Q8N3C7 705 aa18.33■□□□□ 0.52
PNKP-212ENST00000599454 SLC38A5Q8WUX1 472 aa18.33■□□□□ 0.52
PNKP-212ENST00000599454 SEC61A2Q9H9S3 476 aa18.33■□□□□ 0.52
PNKP-212ENST00000599454 PNPOQ9NVS9 261 aa18.33■□□□□ 0.52
PNKP-212ENST00000599454 TMEFF2Q9UIK5 374 aaPredicted RBP18.33■□□□□ 0.52
PNKP-212ENST00000599454 A0A0G2JPF8 293 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 TMEM247A6NEH6 219 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 HNRNPCL2B2RXH8 293 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 HNRNPCL3B7ZW38 293 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 AKAP8O43823 692 aaKnown RBP18.32■□□□□ 0.52
PNKP-212ENST00000599454 HNRNPCL1O60812 293 aaKnown RBP18.32■□□□□ 0.52
PNKP-212ENST00000599454 LILRA1O75019 489 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 FZD7O75084 574 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 ZCCHC18P0CG32 403 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 HNRNPCL4P0DMR1 293 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 PRG2P13727 222 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 ETFAP13804 333 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 PCMT1P22061 227 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 APEX1P27695 318 aaKnown RBP18.32■□□□□ 0.52
PNKP-212ENST00000599454 CRATP43155 626 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 ARF1P84077 181 aaKnown RBP18.32■□□□□ 0.52
PNKP-212ENST00000599454 POU3F1Q03052 451 aaPredicted RBP18.32■□□□□ 0.52
PNKP-212ENST00000599454 SPATA21Q7Z572 469 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 GPR137CQ8N3F9 429 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 SVOPLQ8N434 492 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 UBASH3BQ8TF42 649 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 SLC25A36Q96CQ1 311 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 C1orf159Q96HA4 380 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 OXGR1Q96P68 337 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 DYNLRB1Q9NP97 96 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 USP22Q9UPT9 525 aa18.32■□□□□ 0.52
PNKP-212ENST00000599454 IGHV2OR16-5A0A0B4J2B6 119 aa18.31■□□□□ 0.52
PNKP-212ENST00000599454 OR2T1O43869 369 aa18.31■□□□□ 0.52
PNKP-212ENST00000599454 CELA3BP08861 270 aa18.31■□□□□ 0.52
PNKP-212ENST00000599454 SRP14P37108 136 aaKnown RBP18.31■□□□□ 0.52
PNKP-212ENST00000599454 CDH15P55291 814 aa18.31■□□□□ 0.52
PNKP-212ENST00000599454 BST1Q10588 318 aa18.31■□□□□ 0.52
PNKP-212ENST00000599454 C5orf46Q6UWT4 87 aa18.31■□□□□ 0.52
PNKP-212ENST00000599454 SERPINA11Q86U17 422 aa18.31■□□□□ 0.52
PNKP-212ENST00000599454 PIK3C3Q8NEB9 887 aa18.31■□□□□ 0.52
PNKP-212ENST00000599454 CKAP2Q8WWK9 683 aa18.31■□□□□ 0.52
PNKP-212ENST00000599454 TMEM19Q96HH6 336 aa18.31■□□□□ 0.52
PNKP-212ENST00000599454 PTDSS2Q9BVG9 487 aa18.31■□□□□ 0.52
PNKP-212ENST00000599454 TPT1P8Q9HAU6 139 aa18.31■□□□□ 0.52
PNKP-212ENST00000599454 C12orf10Q9HB07 376 aa18.31■□□□□ 0.52
PNKP-212ENST00000599454 GPR35Q9HC97 309 aa18.31■□□□□ 0.52
PNKP-212ENST00000599454 SLC6A13Q9NSD5 602 aa18.31■□□□□ 0.52
PNKP-212ENST00000599454 CHST2Q9Y4C5 530 aa18.31■□□□□ 0.52
PNKP-212ENST00000599454 DYSFO75923 2080 aa18.3■□□□□ 0.52
PNKP-212ENST00000599454 TMEM129A0AVI4 362 aa18.3■□□□□ 0.52
PNKP-212ENST00000599454 TRPC5OSA6NMA1 111 aa18.3■□□□□ 0.52
PNKP-212ENST00000599454 AIM2O14862 343 aa18.3■□□□□ 0.52
PNKP-212ENST00000599454 ANP32DO95626 131 aa18.3■□□□□ 0.52
PNKP-212ENST00000599454 IDO1P14902 403 aa18.3■□□□□ 0.52
PNKP-212ENST00000599454 RPS5P46782 204 aaKnown RBP18.3■□□□□ 0.52
PNKP-212ENST00000599454 EGR4Q05215 589 aa18.3■□□□□ 0.52
PNKP-212ENST00000599454 RIN1Q13671 783 aa18.3■□□□□ 0.52
PNKP-212ENST00000599454 C1DQ13901 141 aaKnown RBP18.3■□□□□ 0.52
PNKP-212ENST00000599454 ADRM1Q16186 407 aa18.3■□□□□ 0.52
PNKP-212ENST00000599454 PDCD4Q53EL6 469 aaKnown RBP18.3■□□□□ 0.52
PNKP-212ENST00000599454 ATG16L1Q676U5 607 aa18.3■□□□□ 0.52
PNKP-212ENST00000599454 C6orf89Q6UWU4 347 aa18.3■□□□□ 0.52
PNKP-212ENST00000599454 MSANTD1Q6ZTZ1 278 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms