RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 TMEM160Q9NX00 188 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 ZNF443Q9Y2A4 671 aaPredicted RBP12.78□□□□□ -0.36
IRF3-223ENST00000599223 CAPN7Q9Y6W3 813 aa12.78□□□□□ -0.36
IRF3-223ENST00000599223 NBEAL1Q6ZS30 2694 aa12.77□□□□□ -0.36
IRF3-223ENST00000599223 IGHV4-61A0A0C4DH41 118 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 TMEM229AB2RXF0 380 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 NR5A2O00482 541 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 NPIPB7O75200 414 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 UPK3AO75631 287 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 F12P00748 615 aaPredicted RBP12.77□□□□□ -0.37
IRF3-223ENST00000599223 BCHEP06276 602 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 MAP2K6P52564 334 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 CHRNB3Q05901 458 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 LIN52Q52LA3 116 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 CYB5R2Q6BCY4 276 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 SERPINA11Q86U17 422 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 EPHX4Q8IUS5 362 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 PEX5LQ8IYB4 626 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 POMGNT2Q8NAT1 580 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 OR52P1PQ8NH57 321 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 SLC38A5Q8WUX1 472 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 BOD1Q96IK1 185 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 SLC38A2Q96QD8 506 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 SOX7Q9BT81 388 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 CHODLQ9H9P2 273 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 CA10Q9NS85 328 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 P2RX2Q9UBL9 471 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 SEC14L4Q9UDX3 406 aa12.77□□□□□ -0.37
IRF3-223ENST00000599223 A0A096LPE4 126 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 A0A1W2PPZ6 126 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 ZNF503-AS2A6NEH8 195 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 FTCDNL1E5RQL4 147 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 H0YHG0 523 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 RFXANKO14593 260 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 UBDO15205 165 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 WNT11O96014 354 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 CELA3BP08861 270 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 TFPTP0C1Z6 253 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 CECR9P0C854 216 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 UQCRBP14927 111 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 CXCR1P25024 350 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 CALCRP30988 508 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 NR4A2P43354 598 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 ANXA11P50995 505 aaKnown RBP12.76□□□□□ -0.37
IRF3-223ENST00000599223 LSM11P83369 360 aaKnown RBP eCLIP12.76□□□□□ -0.372e-6■■■■□ 19.8
IRF3-223ENST00000599223 TXNL4AP83876 142 aaKnown RBP12.76□□□□□ -0.37
IRF3-223ENST00000599223 GNA13Q14344 377 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 MAPRE2Q15555 327 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 ADIPOQQ15848 244 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 RNF220Q5VTB9 566 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 C1orf140Q5VVS0 124 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 PRAMEF8Q5VWM4 474 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 PRAMEF7Q5VXH5 474 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 WBP2NLQ6ICG8 309 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 CREB3L2Q70SY1 520 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 ZNF440Q8IYI8 595 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 BCL2L2Q92843 193 aaPredicted RBP12.76□□□□□ -0.37
IRF3-223ENST00000599223 C3orf49Q96BT1 292 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 MSI2Q96DH6 328 aaKnown RBP12.76□□□□□ -0.37
IRF3-223ENST00000599223 MAELQ96JY0 434 aaKnown RBP12.76□□□□□ -0.37
IRF3-223ENST00000599223 OR52B2Q96RD2 323 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 PTDSS2Q9BVG9 487 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 RSPO3Q9BXY4 272 aaPredicted RBP12.76□□□□□ -0.37
IRF3-223ENST00000599223 BEX2Q9BXY8 128 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 TAGLN3Q9UI15 199 aa12.76□□□□□ -0.37
IRF3-223ENST00000599223 RRP15Q9Y3B9 282 aaKnown RBP12.76□□□□□ -0.37
IRF3-223ENST00000599223 A8MVM7 634 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 ZNF587BE7ETH6 402 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 LMX1BO60663 402 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 IGLV1-44P01699 117 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 NUDT7P0C024 238 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 PRDX6P30041 224 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 PDLIM4P50479 330 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 DSTNP60981 165 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 SNRPD2P62316 118 aaKnown RBP12.75□□□□□ -0.37
IRF3-223ENST00000599223 MXRA7P84157 204 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 HOXC5Q00444 222 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 NAAAQ02083 359 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 EGR4Q05215 589 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 SQLEQ14534 574 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 GSTA3Q16772 222 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 NIPAL3Q6P499 406 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 VHLLQ6RSH7 139 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 SLC46A3Q7Z3Q1 461 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 SPATA19Q7Z5L4 167 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 COMTD1Q86VU5 262 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 KDM8Q8N371 416 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 OR9I1Q8NGQ6 314 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 TMEM19Q96HH6 336 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 FOXN4Q96NZ1 517 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 RAB3IPQ96QF0 476 aaPredicted RBP12.75□□□□□ -0.37
IRF3-223ENST00000599223 PIMREGQ9BSJ6 248 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 KATNB1Q9BVA0 655 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 SHARPINQ9H0F6 387 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 OBP2BQ9NPH6 170 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 ARMCX1Q9P291 453 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 B3GAT1Q9P2W7 334 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 CRNNQ9UBG3 495 aaPredicted RBP12.75□□□□□ -0.37
IRF3-223ENST00000599223 LPAR3Q9UBY5 353 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 FKBP7Q9Y680 259 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms