RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 VAMP5O95183 116 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 OR6A2O95222 327 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 HIST1H2ABP04908 130 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 EPXP11678 715 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 ZNF43P17038 809 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 AHCYP23526 432 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 IL32P24001 234 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 P2RY4P51582 365 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 SLC16A1P53985 500 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 UGT2B15P54855 530 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 CLDN17P56750 224 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 ST3GAL3Q11203 375 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 FAPQ12884 760 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 POU4F3Q15319 338 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 MS4A18Q3C1V0 323 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 STAC2Q6ZMT1 411 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 CREB3L2Q70SY1 520 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 HIST3H2AQ7L7L0 130 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 CYP4Z1Q86W10 505 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 FAM86B1Q8N7N1 296 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 FAM222BQ8WU58 562 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 TMEM239Q8WW34 195 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 NANOS1Q8WY41 292 aaKnown RBP9.81□□□□□ -0.84
LIG1-211ENST00000596457 HIST1H2ACQ93077 130 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 CLPTM1LQ96KA5 538 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 LURAP1Q96LR2 239 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 PRRC1Q96M27 445 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 OXGR1Q96P68 337 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 THTPAQ9BU02 230 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 SF3B5Q9BWJ5 86 aaKnown RBP9.81□□□□□ -0.84
LIG1-211ENST00000596457 POLR2J2Q9GZM3 115 aaKnown RBP9.81□□□□□ -0.84
LIG1-211ENST00000596457 POLR2J3Q9H1A7 115 aaKnown RBP9.81□□□□□ -0.84
LIG1-211ENST00000596457 GORASP2Q9H8Y8 452 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 MCCC2Q9HCC0 563 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 PARPBPQ9NWS1 579 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 TAS2R1Q9NYW7 299 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 A4GNTQ9UNA3 340 aa9.81□□□□□ -0.84
LIG1-211ENST00000596457 FAM32AQ9Y421 112 aaKnown RBP9.81□□□□□ -0.84
LIG1-211ENST00000596457 MTORP42345 2549 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 CIB4A0PJX0 185 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 BLOC1S5-TXNDC5H3BN57 136 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 GYG2O15488 501 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 DIRAS1O95057 198 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 ADORA3P0DMS8 318 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 CDH2P19022 906 aaPredicted RBP9.8□□□□□ -0.84
LIG1-211ENST00000596457 FUT4P22083 530 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 DNAJA1P31689 397 aaKnown RBP9.8□□□□□ -0.84
LIG1-211ENST00000596457 CCKARP32238 428 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 SELENOPP49908 381 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 MFSD13AQ14CX5 517 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 TRAM2Q15035 370 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 STK11Q15831 433 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 SFRP5Q5T4F7 317 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 TSPO2Q5TGU0 170 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 CARD17Q5XLA6 110 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 FBXW9Q5XUX1 488 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 BHLHA15Q7RTS1 189 aaPredicted RBP9.8□□□□□ -0.84
LIG1-211ENST00000596457 MEX3DQ86XN8 651 aaKnown RBP9.8□□□□□ -0.84
LIG1-211ENST00000596457 WFDC8Q8IUA0 241 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 EPHX4Q8IUS5 362 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 UEVLDQ8IX04 471 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 GABRG1Q8N1C3 465 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 LRRC17Q8N6Y2 441 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 ZIC4Q8N9L1 334 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 OR5J2Q8NH18 312 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 OR6S1Q8NH40 331 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 KISS1RQ969F8 398 aaPredicted RBP9.8□□□□□ -0.84
LIG1-211ENST00000596457 SGTBQ96EQ0 304 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 PYURFQ96I23 114 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 HS6ST2Q96MM7 605 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 DACH2Q96NX9 599 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 SEPHS2Q99611 448 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 ACTR6Q9GZN1 396 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 MEPEQ9NQ76 525 aaPredicted RBP9.8□□□□□ -0.84
LIG1-211ENST00000596457 NANSQ9NR45 359 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 B3GALT5Q9Y2C3 310 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 GPR52Q9Y2T5 361 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 MED31Q9Y3C7 131 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 CORINQ9Y5Q5 1042 aa9.8□□□□□ -0.84
LIG1-211ENST00000596457 A6NNC1 897 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 PLPP3O14495 311 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 FFAR1O14842 300 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 RNF13O43567 381 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 RAD51DO75771 328 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 STAMBPO95630 424 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 HPRP00739 348 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 MT-ATP6P00846 226 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 MT-ND1P03886 318 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 IFI30P13284 250 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 HLA-DOBP13765 273 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 FUT1P19526 365 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 IGHV1-2P23083 117 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 RBM34P42696 430 aaKnown RBP9.79□□□□□ -0.84
LIG1-211ENST00000596457 FOXG1P55316 489 aaPredicted RBP9.79□□□□□ -0.84
LIG1-211ENST00000596457 KRTAP10-9P60411 292 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 POU3F1Q03052 451 aaPredicted RBP9.79□□□□□ -0.84
LIG1-211ENST00000596457 LGALS3BPQ08380 585 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 ITGADQ13349 1161 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 ZNF74Q16587 644 aa9.79□□□□□ -0.84
LIG1-211ENST00000596457 SPATS1Q496A3 300 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms