RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 DUSP18Q8NEJ0 188 aa20.66■□□□□ 0.9
SRRM1-222ENST00000596378 ELF4Q99607 663 aaPredicted RBP20.66■□□□□ 0.9
SRRM1-222ENST00000596378 THAP7Q9BT49 309 aaPredicted RBP20.66■□□□□ 0.9
SRRM1-222ENST00000596378 PCNX3Q9H6A9 2034 aa20.66■□□□□ 0.9
SRRM1-222ENST00000596378 KHNYNO15037 678 aaKnown RBP20.66■□□□□ 0.9
SRRM1-222ENST00000596378 EEF1E1O43324 174 aaKnown RBP20.66■□□□□ 0.9
SRRM1-222ENST00000596378 GLCEO94923 617 aa20.66■□□□□ 0.9
SRRM1-222ENST00000596378 CD14P08571 375 aa20.66■□□□□ 0.9
SRRM1-222ENST00000596378 RBMS1P29558 406 aaKnown RBP20.66■□□□□ 0.9
SRRM1-222ENST00000596378 CAPZA2P47755 286 aa20.66■□□□□ 0.9
SRRM1-222ENST00000596378 NR0B1P51843 470 aaKnown RBP20.66■□□□□ 0.9
SRRM1-222ENST00000596378 RAB25P57735 213 aa20.66■□□□□ 0.9
SRRM1-222ENST00000596378 SLC35D3Q5M8T2 416 aa20.66■□□□□ 0.9
SRRM1-222ENST00000596378 ESPNLQ6ZVH7 1005 aa20.66■□□□□ 0.9
SRRM1-222ENST00000596378 MARCH3Q86UD3 253 aa20.66■□□□□ 0.9
SRRM1-222ENST00000596378 SLC7A5P1Q8MH63 180 aa20.66■□□□□ 0.9
SRRM1-222ENST00000596378 TEX19Q8NA77 164 aa20.66■□□□□ 0.9
SRRM1-222ENST00000596378 TRIM63Q969Q1 353 aa20.66■□□□□ 0.9
SRRM1-222ENST00000596378 OR1F2PQ96R84 312 aa20.66■□□□□ 0.9
SRRM1-222ENST00000596378 KLHDC2Q9Y2U9 406 aa20.66■□□□□ 0.9
SRRM1-222ENST00000596378 HCRTR2O43614 444 aa20.65■□□□□ 0.9
SRRM1-222ENST00000596378 FZD7O75084 574 aa20.65■□□□□ 0.9
SRRM1-222ENST00000596378 SERPINA3P01011 423 aa20.65■□□□□ 0.9
SRRM1-222ENST00000596378 ASAH2BP0C7U1 165 aa20.65■□□□□ 0.9
SRRM1-222ENST00000596378 EPHA4P54764 986 aa20.65■□□□□ 0.9
SRRM1-222ENST00000596378 NANOS3P60323 173 aaKnown RBP20.65■□□□□ 0.9
SRRM1-222ENST00000596378 RPL18Q07020 188 aaKnown RBP20.65■□□□□ 0.9
SRRM1-222ENST00000596378 NSDHLQ15738 373 aa20.65■□□□□ 0.9
SRRM1-222ENST00000596378 TMEM53Q6P2H8 277 aa20.65■□□□□ 0.9
SRRM1-222ENST00000596378 SHISA6Q6ZSJ9 500 aa20.65■□□□□ 0.9
SRRM1-222ENST00000596378 SLC35F3Q8IY50 421 aa20.65■□□□□ 0.9
SRRM1-222ENST00000596378 HSD17B8Q92506 261 aa20.65■□□□□ 0.9
SRRM1-222ENST00000596378 TAAR8Q969N4 342 aa20.65■□□□□ 0.9
SRRM1-222ENST00000596378 SRA1Q9HD15 236 aaKnown RBP20.65■□□□□ 0.9
SRRM1-222ENST00000596378 EXOSC3Q9NQT5 275 aaKnown RBP20.65■□□□□ 0.9
SRRM1-222ENST00000596378 BOLA1Q9Y3E2 137 aa20.65■□□□□ 0.9
SRRM1-222ENST00000596378 WDR87Q6ZQQ6 2873 aa20.65■□□□□ 0.9
SRRM1-222ENST00000596378 EPXP11678 715 aa20.65■□□□□ 0.9
SRRM1-222ENST00000596378 GPR176Q14439 515 aa20.65■□□□□ 0.9
SRRM1-222ENST00000596378 EBPQ15125 230 aaKnown RBP20.65■□□□□ 0.9
SRRM1-222ENST00000596378 RFT1Q96AA3 541 aa20.65■□□□□ 0.9
SRRM1-222ENST00000596378 TRAV1-2A0A0B4J238 106 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 UCHL1P09936 223 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 TRAPPC2P0DI81 140 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 TRAPPC2BP0DI82 140 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 FBLP22087 321 aaKnown RBP20.64■□□□□ 0.89
SRRM1-222ENST00000596378 IL12BP29460 328 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 SRP9P49458 86 aaKnown RBP20.64■□□□□ 0.89
SRRM1-222ENST00000596378 BIKQ13323 160 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 ELAVL1Q15717 326 aaKnown RBP20.64■□□□□ 0.89
SRRM1-222ENST00000596378 ISXQ2M1V0 245 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 C1QL3Q5VWW1 255 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 C7orf57Q8NEG2 295 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 CHRDQ9H2X0 955 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 BRD7Q9NPI1 651 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 TCRBV16S1A1N1A0A5B0 115 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 ACOD1A6NK06 481 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 FLRT2O43155 660 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 RPP14O95059 124 aaKnown RBP20.64■□□□□ 0.89
SRRM1-222ENST00000596378 ITPKBP27987 946 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 UQCRC1P31930 480 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 HOXD12P35452 270 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 CLDN20P56880 219 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 SLC25A45Q8N413 288 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 TSPAN32Q96QS1 320 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 GFM1Q96RP9 751 aaKnown RBP20.64■□□□□ 0.89
SRRM1-222ENST00000596378 SLC25A18Q9H1K4 315 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 ZNF304Q9HCX3 659 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 RXFP3Q9NSD7 469 aa20.64■□□□□ 0.89
SRRM1-222ENST00000596378 TMEM72A0PK05 275 aa20.63■□□□□ 0.89
SRRM1-222ENST00000596378 TVP23AA6NH52 213 aa20.63■□□□□ 0.89
SRRM1-222ENST00000596378 CENPXA8MT69 81 aa20.63■□□□□ 0.89
SRRM1-222ENST00000596378 NOTOA8MTQ0 251 aa20.63■□□□□ 0.89
SRRM1-222ENST00000596378 SDHAP31040 664 aa20.63■□□□□ 0.89
SRRM1-222ENST00000596378 RPS27P42677 84 aaKnown RBP20.63■□□□□ 0.89
SRRM1-222ENST00000596378 MRPS15P82914 257 aaKnown RBP20.63■□□□□ 0.89
SRRM1-222ENST00000596378 MESTQ5EB52 335 aa20.63■□□□□ 0.89
SRRM1-222ENST00000596378 NANOGNBQ7Z5D8 188 aa20.63■□□□□ 0.89
SRRM1-222ENST00000596378 EXD3Q8N9H8 876 aa20.63■□□□□ 0.89
SRRM1-222ENST00000596378 LIPHQ8WWY8 451 aa20.63■□□□□ 0.89
SRRM1-222ENST00000596378 RNF166Q96A37 237 aaPredicted RBP20.63■□□□□ 0.89
SRRM1-222ENST00000596378 NOX4Q9NPH5 578 aa20.63■□□□□ 0.89
SRRM1-222ENST00000596378 NPFFR2Q9Y5X5 522 aa20.63■□□□□ 0.89
SRRM1-222ENST00000596378 CFAP54Q96N23 3096 aa20.63■□□□□ 0.89
SRRM1-222ENST00000596378 NUP210LQ5VU65 1888 aa20.63■□□□□ 0.89
SRRM1-222ENST00000596378 PIN1P1O15428 100 aa20.62■□□□□ 0.89
SRRM1-222ENST00000596378 ARL6IP5O75915 188 aa20.62■□□□□ 0.89
SRRM1-222ENST00000596378 NUDT14O95848 222 aa20.62■□□□□ 0.89
SRRM1-222ENST00000596378 GPANK1O95872 356 aa20.62■□□□□ 0.89
SRRM1-222ENST00000596378 OR8G3PP0DMU2 310 aa20.62■□□□□ 0.89
SRRM1-222ENST00000596378 POU3F3P20264 500 aaPredicted RBP20.62■□□□□ 0.89
SRRM1-222ENST00000596378 ARHGAP40Q5TG30 622 aa20.62■□□□□ 0.89
SRRM1-222ENST00000596378 LANCL3Q6ZV70 420 aa20.62■□□□□ 0.89
SRRM1-222ENST00000596378 CEP76Q8TAP6 659 aa20.62■□□□□ 0.89
SRRM1-222ENST00000596378 DERL3Q96Q80 235 aa20.62■□□□□ 0.89
SRRM1-222ENST00000596378 OR2B2Q9GZK3 357 aa20.62■□□□□ 0.89
SRRM1-222ENST00000596378 MKL2Q9ULH7 1088 aa20.62■□□□□ 0.89
SRRM1-222ENST00000596378 MRPS7Q9Y2R9 242 aaKnown RBP20.62■□□□□ 0.89
SRRM1-222ENST00000596378 DUX1O43812 170 aa20.62■□□□□ 0.89
SRRM1-222ENST00000596378 HSD17B12Q53GQ0 312 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms