RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 ACSM5Q6NUN0 579 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 PTCHD4Q6ZW05 846 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 NANOGNBQ7Z5D8 188 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 ATCAYQ86WG3 371 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 OR8D4Q8NGM9 314 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 OR4Q3Q8NH05 313 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 OR5J2Q8NH18 312 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 TRUB1Q8WWH5 349 aaKnown RBP11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 SMPDL3BQ92485 455 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 PLEKHA8Q96JA3 519 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 ARL5BQ96KC2 179 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 TMEM185BQ9H7F4 350 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 ZNF703Q9H7S9 590 aaPredicted RBP11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 MCCC2Q9HCC0 563 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 PNPLA3Q9NST1 481 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 IL20RAQ9UHF4 553 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 BAIAP2Q9UQB8 552 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 CORINQ9Y5Q5 1042 aa11.75□□□□□ -0.53
SHKBP1-209ENST00000595803 COL8A1P27658 744 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 GRK5P34947 590 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 AQP2P41181 271 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 MAGEA5P43359 124 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 CHN2P52757 468 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 MYBPC1Q00872 1141 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 CD47Q08722 323 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 MYBPHQ13203 477 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 CDK5R2Q13319 367 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 TOP3AQ13472 1001 aaPredicted RBP11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 ZNF169Q14929 603 aaPredicted RBP11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 MAD2L1BPQ15013 274 aaPredicted RBP11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 PGGHGQ32M88 737 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 KRTAP21-3Q3LHN1 58 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 SLC6A19Q695T7 634 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 UGT2A3Q6UWM9 527 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 DPY19L2P2Q6ZN68 376 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 TMPPEQ6ZT21 453 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 FAM109AQ8N4B1 249 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 MOSPD2Q8NHP6 518 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 UBE2FQ969M7 185 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 YTHDF1Q9BYJ9 559 aaKnown RBP11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 ENKD1Q9H0I2 346 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 DEFB127Q9H1M4 99 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 LDAHQ9H6V9 325 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 EXO5Q9H790 373 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 RASSF1Q9NS23 344 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 CLN6Q9NWW5 311 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 MRPL39Q9NYK5 338 aaKnown RBP11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 ZNF226Q9NYT6 803 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 RNF6Q9Y252 685 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 TRAPPC4Q9Y296 219 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 HIF3AQ9Y2N7 669 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 SLC6A5Q9Y345 797 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 IER3IP1Q9Y5U9 82 aa11.74□□□□□ -0.53
SHKBP1-209ENST00000595803 A0A1W2PNR3 127 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 MAGEA13PA6NCF6 341 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 LIPT2A6NK58 231 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 FTCDNL1E5RQL4 147 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 SULT2B1O00204 365 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 TLX2O43763 284 aaPredicted RBP11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 PPP1R3DO95685 299 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 ADORA3P0DMS8 318 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 AHCYP23526 432 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 NOS3P29474 1203 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 PCYT1AP49585 367 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 STARP49675 285 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 FXYD6P3P58550 94 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 CTXN1P60606 82 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 SLC35A1P78382 337 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 FHL1Q13642 323 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 SGCBQ16585 318 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 ALG10Q5BKT4 473 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 C6orf141Q5SZD1 244 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 PDSS1Q5T2R2 415 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 THSD4Q6ZMP0 1018 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 H1FNTQ75WM6 255 aaPredicted RBP11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 IGFN1Q86VF2 1251 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 CCDC71Q8IV32 467 aaPredicted RBP11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 ENTHD1Q8IYW4 607 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 ZNF786Q8N393 782 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 LNX2Q8N448 690 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 TCEANCQ8N8B7 351 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 SCAIQ8N9R8 606 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 OR8J1Q8NGP2 316 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 RHOXF1Q8NHV9 184 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 ABHD17AQ96GS6 310 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 KLHL15Q96M94 604 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 Q96MT0 163 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 ERMAPQ96PL5 475 aaPredicted RBP11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 IL4I1Q96RQ9 567 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 NAA11Q9BSU3 229 aaPredicted RBP11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 POLDIP3Q9BY77 421 aaKnown RBP11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 MFRPQ9BY79 579 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 ACKR4Q9NPB9 350 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 ZNF71Q9NQZ8 489 aaPredicted RBP11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 ALKBH4Q9NXW9 302 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 MYRFQ9Y2G1 1151 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 PCDHGB5Q9Y5G0 923 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 FBN3Q75N90 2809 aa11.73□□□□□ -0.53
SHKBP1-209ENST00000595803 C11orf98E9PRG8 122 aa11.72□□□□□ -0.53
SHKBP1-209ENST00000595803 M0R082 166 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms