RNA–Protein interactions for RNA: ENST00000595313.5

SOX2-OT-224, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 716 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-224ENST00000595313 COL6A3P12111 3177 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 MYO3AQ8NEV4 1616 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 N4BP1O75113 896 aaKnown RBP2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 NEBLO76041 1014 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 STAMBPO95630 424 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 GIPP09681 153 aaPredicted RBP2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 COX5AP20674 150 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 ATP6V1B2P21281 511 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 NMUP48645 174 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 MNAT1P51948 309 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 SLC25A52Q3SY17 297 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 GGTA1PQ4G0N0 100 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 NCR3LG1Q68D85 454 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 GRAMD2AQ8IUY3 354 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 OR4D9Q8NGE8 314 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 ZNF721Q8TF20 911 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 HTR3CQ8WXA8 447 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 DEDD2Q8WXF8 326 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 DTNBP1Q96EV8 351 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 PAGE5Q96GU1 130 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 C4orf36Q96KX1 117 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 C7orf34Q96L11 122 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 CEP170P1Q96L14 293 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 HDHD3Q9BSH5 251 aaPredicted RBP2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 TUBGCP2Q9BSJ2 902 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 POLR1EQ9GZS1 481 aaKnown RBP2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 TMEM117Q9H0C3 514 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 CCL28Q9NRJ3 127 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 RNF14Q9UBS8 474 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 TRAPPC4Q9Y296 219 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 DISP1Q96F81 1524 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 DIP2AQ14689 1571 aa2.4□□□□□ -2.03
SOX2-OT-224ENST00000595313 SUPT6HQ7KZ85 1726 aaKnown RBP2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 SCAF11Q99590 1463 aaKnown RBP2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 HECW1Q76N89 1606 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 ABCA9Q8IUA7 1624 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 CPS1P31327 1500 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 ZC3H13Q5T200 1668 aaKnown RBP2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 MBLAC1A4D2B0 266 aaPredicted RBP2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 C11orf94C9JXX5 98 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 H0YCG3 227 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 BTN3A3O00478 584 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 AGPAT2O15120 278 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 TAPBPO15533 448 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 SS18L1O75177 396 aaPredicted RBP2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 BCAS1O75363 584 aaPredicted RBP2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 SCGNO76038 276 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 PNMA6AP0CW24 399 aaPredicted RBP2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 RPA2P15927 270 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 ATP6V1C1P21283 382 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 CALCRP30988 508 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 SHMT2P34897 504 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 GLP1RP43220 463 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 SSR1P43307 286 aaKnown RBP2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 TDO2P48775 406 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 RSPO1Q2MKA7 263 aaPredicted RBP2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 NADK2Q4G0N4 442 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 BOLA3Q53S33 107 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 CFAP157Q5JU67 520 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 TIGD3Q6B0B8 471 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 FRMPD2BQ6IN97 320 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 FAM71E1Q6IPT2 247 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 SLC25A24Q6NUK1 477 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 LRRC31Q6UY01 552 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 PPP1R42Q7Z4L9 355 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 CAMK2N1Q7Z7J9 78 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 ACOT1Q86TX2 421 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 ZDHHC21Q8IVQ6 265 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 C12orf56Q8IXR9 622 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 STXBP6Q8NFX7 210 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 TRMT10AQ8TBZ6 339 aaKnown RBP2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 STARD8Q92502 1023 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 NXF5Q9H1B4 397 aaKnown RBP2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 DEFB127Q9H1M4 99 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 RMND5AQ9H871 391 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 CGNQ9P2M7 1197 aaKnown RBP2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 CLCF1Q9UBD9 225 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 TMCC3Q9ULS5 477 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 RPH3ALQ9UNE2 315 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 FHAD1B1AJZ9 1412 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 FHOD3Q2V2M9 1422 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 ABCA8O94911 1581 aa2.39□□□□□ -2.03
SOX2-OT-224ENST00000595313 TRDCB7Z8K6 153 aa2.38□□□□□ -2.03
SOX2-OT-224ENST00000595313 PHLPP1O60346 1717 aa2.38□□□□□ -2.03
SOX2-OT-224ENST00000595313 LRATO95237 230 aa2.38□□□□□ -2.03
SOX2-OT-224ENST00000595313 UGT2B4P06133 528 aa2.38□□□□□ -2.03
SOX2-OT-224ENST00000595313 HSMCR30P0CW71 290 aa2.38□□□□□ -2.03
SOX2-OT-224ENST00000595313 DRD5P21918 477 aa2.38□□□□□ -2.03
SOX2-OT-224ENST00000595313 ANXA13P27216 316 aa2.38□□□□□ -2.03
SOX2-OT-224ENST00000595313 IFNAR2P48551 515 aa2.38□□□□□ -2.03
SOX2-OT-224ENST00000595313 ARRB1P49407 418 aaPredicted RBP2.38□□□□□ -2.03
SOX2-OT-224ENST00000595313 PPT1P50897 306 aa2.38□□□□□ -2.03
SOX2-OT-224ENST00000595313 CBX1P83916 185 aa2.38□□□□□ -2.03
SOX2-OT-224ENST00000595313 CNTN2Q02246 1040 aa2.38□□□□□ -2.03
SOX2-OT-224ENST00000595313 SLAQ13239 276 aa2.38□□□□□ -2.03
SOX2-OT-224ENST00000595313 GANABQ14697 944 aaKnown RBP2.38□□□□□ -2.03
SOX2-OT-224ENST00000595313 DEFB116Q30KQ4 102 aa2.38□□□□□ -2.03
SOX2-OT-224ENST00000595313 PARP15Q460N3 678 aa2.38□□□□□ -2.03
SOX2-OT-224ENST00000595313 USH1GQ495M9 461 aa2.38□□□□□ -2.03
SOX2-OT-224ENST00000595313 TP53I3Q53FA7 332 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms