RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 LCN8Q6JVE9 175 aa22.81■■□□□ 1.24
TRIM28-204ENST00000594806 CASP12Q6UXS9 341 aa22.81■■□□□ 1.24
TRIM28-204ENST00000594806 STAC2Q6ZMT1 411 aa22.81■■□□□ 1.24
TRIM28-204ENST00000594806 AAED1Q7RTV5 226 aa22.81■■□□□ 1.24
TRIM28-204ENST00000594806 LSRQ86X29 649 aaPredicted RBP22.81■■□□□ 1.24
TRIM28-204ENST00000594806 DHFR2Q86XF0 187 aa22.81■■□□□ 1.24
TRIM28-204ENST00000594806 PIK3C3Q8NEB9 887 aa22.81■■□□□ 1.24
TRIM28-204ENST00000594806 SLC7A6OSQ96CW6 309 aaPredicted RBP22.81■■□□□ 1.24
TRIM28-204ENST00000594806 MEPEQ9NQ76 525 aaPredicted RBP22.81■■□□□ 1.24
TRIM28-204ENST00000594806 CRIM1Q9NZV1 1036 aa22.81■■□□□ 1.24
TRIM28-204ENST00000594806 NDUFAF4Q9P032 175 aa22.81■■□□□ 1.24
TRIM28-204ENST00000594806 MS4A18H0YCH9 400 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 J3KTA2 159 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 PRSS23O95084 383 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 SEMG1P04279 462 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 HIST1H2ABP04908 130 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 CBLP22681 906 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 UGT2B15P54855 530 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 PUDPQ08623 228 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 TRAP1Q12931 704 aaKnown RBP22.8■■□□□ 1.24
TRIM28-204ENST00000594806 ITGADQ13349 1161 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 C1DQ13901 141 aaKnown RBP22.8■■□□□ 1.24
TRIM28-204ENST00000594806 MS4A18Q3C1V0 323 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 HIST3H2AQ7L7L0 130 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 EPHX4Q8IUS5 362 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 ZNF295-AS1Q8N0V1 137 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 FAM86B1Q8N7N1 296 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 STEAP2Q8NFT2 490 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 LIPHQ8WWY8 451 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 HIST1H2ACQ93077 130 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 SGTBQ96EQ0 304 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 ZNF385AQ96PM9 386 aaKnown RBP22.8■■□□□ 1.24
TRIM28-204ENST00000594806 B3GAT1Q9P2W7 334 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 PRSS50Q9UI38 385 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 RCE1Q9Y256 329 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 NOX1Q9Y5S8 564 aa22.8■■□□□ 1.24
TRIM28-204ENST00000594806 SH3D21A4FU49 640 aa22.79■■□□□ 1.24
TRIM28-204ENST00000594806 KPNA4O00629 521 aaPredicted RBP22.79■■□□□ 1.24
TRIM28-204ENST00000594806 PLPP3O14495 311 aa22.79■■□□□ 1.24
TRIM28-204ENST00000594806 AKAP8O43823 692 aaKnown RBP22.79■■□□□ 1.24
TRIM28-204ENST00000594806 PDE5AO76074 875 aa22.79■■□□□ 1.24
TRIM28-204ENST00000594806 OR6A2O95222 327 aa22.79■■□□□ 1.24
TRIM28-204ENST00000594806 ADAP00813 363 aa22.79■■□□□ 1.24
TRIM28-204ENST00000594806 ASAH2BP0C7U1 165 aa22.79■■□□□ 1.24
TRIM28-204ENST00000594806 PTNP21246 168 aa22.79■■□□□ 1.24
TRIM28-204ENST00000594806 NTF4P34130 210 aa22.79■■□□□ 1.24
TRIM28-204ENST00000594806 ZP4Q12836 540 aa22.79■■□□□ 1.24
TRIM28-204ENST00000594806 DAZAP2Q15038 168 aaPredicted RBP22.79■■□□□ 1.24
TRIM28-204ENST00000594806 SFRP5Q5T4F7 317 aa22.79■■□□□ 1.24
TRIM28-204ENST00000594806 TSEN54Q7Z6J9 526 aaKnown RBP22.79■■□□□ 1.24
TRIM28-204ENST00000594806 PXKQ7Z7A4 578 aa22.79■■□□□ 1.24
TRIM28-204ENST00000594806 UEVLDQ8IX04 471 aa22.79■■□□□ 1.24
TRIM28-204ENST00000594806 POMGNT2Q8NAT1 580 aa22.79■■□□□ 1.24
TRIM28-204ENST00000594806 LINC01560Q8TB33 94 aa22.79■■□□□ 1.24
TRIM28-204ENST00000594806 ACOT11Q8WXI4 607 aaPredicted RBP22.79■■□□□ 1.24
TRIM28-204ENST00000594806 NMNAT1Q9HAN9 279 aaPredicted RBP22.79■■□□□ 1.24
TRIM28-204ENST00000594806 MAN2C1Q9NTJ4 1040 aa22.79■■□□□ 1.24
TRIM28-204ENST00000594806 SEC14L4Q9UDX3 406 aa22.79■■□□□ 1.24
TRIM28-204ENST00000594806 MALT1Q9UDY8 824 aa22.79■■□□□ 1.24
TRIM28-204ENST00000594806 A0A1W2PRQ8 180 aa22.78■■□□□ 1.24
TRIM28-204ENST00000594806 ENO4A6NNW6 628 aa22.78■■□□□ 1.24
TRIM28-204ENST00000594806 DNAJC8O75937 253 aaPredicted RBP22.78■■□□□ 1.24
TRIM28-204ENST00000594806 H1F0P07305 194 aaKnown RBP22.78■■□□□ 1.24
TRIM28-204ENST00000594806 SMIM11AP58511 58 aa22.78■■□□□ 1.24
TRIM28-204ENST00000594806 VLDLRP98155 873 aa22.78■■□□□ 1.24
TRIM28-204ENST00000594806 SNTB1Q13884 538 aaKnown RBP22.78■■□□□ 1.24
TRIM28-204ENST00000594806 DGCR6Q14129 220 aa22.78■■□□□ 1.24
TRIM28-204ENST00000594806 CXorf67Q86X51 503 aaPredicted RBP22.78■■□□□ 1.24
TRIM28-204ENST00000594806 UBE2J2Q8N2K1 259 aa22.78■■□□□ 1.24
TRIM28-204ENST00000594806 KDM8Q8N371 416 aa22.78■■□□□ 1.24
TRIM28-204ENST00000594806 PIP5K1AQ99755 562 aa22.78■■□□□ 1.24
TRIM28-204ENST00000594806 IL1RAPQ9NPH3 570 aa22.78■■□□□ 1.24
TRIM28-204ENST00000594806 ASB6Q9NWX5 421 aa22.78■■□□□ 1.24
TRIM28-204ENST00000594806 ZNF226Q9NYT6 803 aa22.78■■□□□ 1.24
TRIM28-204ENST00000594806 UPB1Q9UBR1 384 aa22.78■■□□□ 1.24
TRIM28-204ENST00000594806 TESMINQ9Y4I5 508 aa22.78■■□□□ 1.24
TRIM28-204ENST00000594806 UNC79Q9P2D8 2635 aa22.78■■□□□ 1.24
TRIM28-204ENST00000594806 LRRN3E7EW58 273 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 CASKO14936 926 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 OR7A10O76100 309 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 FABP3P05413 133 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 ADORA3P0DMS8 318 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 UMPSP11172 480 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 FUT1P19526 365 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 COX5AP20674 150 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 CCKARP32238 428 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 MS4A2Q01362 244 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 IL1RL1Q01638 556 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 PGM2L1Q6PCE3 622 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 CYP2R1Q6VVX0 501 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 RRM2BQ7LG56 351 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 SSX8Q7RTT4 187 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 SLC46A3Q7Z3Q1 461 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 ABHD12BQ7Z5M8 362 aaPredicted RBP22.77■■□□□ 1.24
TRIM28-204ENST00000594806 PFN4Q8NHR9 129 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 KISS1RQ969F8 398 aaPredicted RBP22.77■■□□□ 1.24
TRIM28-204ENST00000594806 LRGUKQ96M69 825 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 ZNF347Q96SE7 839 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 MED18Q9BUE0 208 aa22.77■■□□□ 1.24
TRIM28-204ENST00000594806 TRIM15Q9C019 465 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms