RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 SYT6Q5T7P8 510 aaPredicted RBP13.67□□□□□ -0.22
VRK3-207ENST00000594092 UBE2UQ5VVX9 321 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 ARHGAP11AQ6P4F7 1023 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 SLC25A43Q8WUT9 341 aaPredicted RBP13.67□□□□□ -0.22
VRK3-207ENST00000594092 ERMAPQ96PL5 475 aaPredicted RBP13.67□□□□□ -0.22
VRK3-207ENST00000594092 CDCA4Q9BXL8 241 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 NRIP3Q9NQ35 241 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 TAS2R5Q9NYW4 299 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 H2AFY2Q9P0M6 372 aaPredicted RBP13.67□□□□□ -0.22
VRK3-207ENST00000594092 WARS2Q9UGM6 360 aaKnown RBP13.67□□□□□ -0.22
VRK3-207ENST00000594092 KLF13Q9Y2Y9 288 aaPredicted RBP13.67□□□□□ -0.22
VRK3-207ENST00000594092 ADAM18Q9Y3Q7 739 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 IER3IP1Q9Y5U9 82 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 COMMD3-BMI1R4GMX3 469 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 MED12Q93074 2177 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 NCKAP5O14513 1909 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 LIPT2A6NK58 231 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 RIIAD1A6NNX1 92 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 M0R082 166 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 CEACAM4O75871 244 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 CD46P15529 392 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 FKBP2P26885 142 aaKnown RBP13.67□□□□□ -0.22
VRK3-207ENST00000594092 PSMB9P28065 219 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 IDUAP35475 653 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 B3GALT5-AS1P59052 145 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 ERVK-25P63136 954 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 MYBPHQ13203 477 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 IRF3Q14653 427 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 MFSD13AQ14CX5 517 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 OR7A5Q15622 319 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 ZNF362Q5T0B9 420 aaPredicted RBP13.67□□□□□ -0.22
VRK3-207ENST00000594092 AADACL4Q5VUY2 407 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 NXNL2Q5VZ03 156 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 IGFL2Q6UWQ7 119 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 CXXC5Q7LFL8 322 aaKnown RBP13.67□□□□□ -0.22
VRK3-207ENST00000594092 GALNTL5Q7Z4T8 443 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 YRDCQ86U90 279 aaKnown RBP13.67□□□□□ -0.22
VRK3-207ENST00000594092 ZNF417Q8TAU3 575 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 ISOC1Q96CN7 298 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 NMD3Q96D46 503 aaKnown RBP13.67□□□□□ -0.22
VRK3-207ENST00000594092 CRELD1Q96HD1 420 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 ZNF587Q96SQ5 575 aaPredicted RBP13.67□□□□□ -0.22
VRK3-207ENST00000594092 PIGQQ9BRB3 760 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 KATNB1Q9BVA0 655 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 ASPNQ9BXN1 380 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 NDEL1Q9GZM8 345 aa13.67□□□□□ -0.22
VRK3-207ENST00000594092 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.67□□□□□ -0.22
VRK3-207ENST00000594092 HINT3Q9NQE9 182 aaKnown RBP13.67□□□□□ -0.22
VRK3-207ENST00000594092 MRPL39Q9NYK5 338 aaKnown RBP13.67□□□□□ -0.22
VRK3-207ENST00000594092 MRPS18CQ9Y3D5 142 aaKnown RBP13.67□□□□□ -0.22
VRK3-207ENST00000594092 M0R3G1 203 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 ARPC3O15145 178 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 FZD7O75084 574 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 IFNGP01579 166 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 F13BP05160 661 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 CD14P08571 375 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 ZNF3P17036 446 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 GDF1P27539 372 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 SFTPDP35247 375 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 CLK1P49759 484 aaKnown RBP13.66□□□□□ -0.22
VRK3-207ENST00000594092 CTXN1P60606 82 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 C19orf57Q0VDD7 668 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 RAB40BQ12829 278 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 TMEM176BQ3YBM2 270 aaPredicted RBP13.66□□□□□ -0.22
VRK3-207ENST00000594092 CPOQ8IVL8 374 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 GID4Q8IVV7 300 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 FAM83FQ8NEG4 500 aaPredicted RBP13.66□□□□□ -0.22
VRK3-207ENST00000594092 OR14L1PQ8NHC6 308 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 OTULINQ96BN8 352 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 RNFT2Q96EX2 444 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 C5orf34Q96MH7 638 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 TAPBPLQ9BX59 468 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 OR2B2Q9GZK3 357 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 MRPS18AQ9NVS2 196 aaKnown RBP13.66□□□□□ -0.22
VRK3-207ENST00000594092 SLC6A5Q9Y345 797 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 CORINQ9Y5Q5 1042 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 FREM3P0C091 2139 aa13.66□□□□□ -0.22
VRK3-207ENST00000594092 A0A1W2PNR3 127 aa13.65□□□□□ -0.22
VRK3-207ENST00000594092 VGLL3A8MV65 326 aa13.65□□□□□ -0.22
VRK3-207ENST00000594092 PLPP3O14495 311 aa13.65□□□□□ -0.22
VRK3-207ENST00000594092 TRMUO75648 421 aaKnown RBP13.65□□□□□ -0.22
VRK3-207ENST00000594092 RAB36O95755 333 aa13.65□□□□□ -0.22
VRK3-207ENST00000594092 LCKP06239 509 aa13.65□□□□□ -0.22
VRK3-207ENST00000594092 ADORA3P0DMS8 318 aa13.65□□□□□ -0.22
VRK3-207ENST00000594092 HIST1H1CP16403 213 aaKnown RBP13.65□□□□□ -0.22
VRK3-207ENST00000594092 RFC3P40938 356 aa13.65□□□□□ -0.22
VRK3-207ENST00000594092 MTNR1AP48039 350 aa13.65□□□□□ -0.22
VRK3-207ENST00000594092 TNFSF10P50591 281 aa13.65□□□□□ -0.22
VRK3-207ENST00000594092 PLBD1Q6P4A8 553 aa13.65□□□□□ -0.22
VRK3-207ENST00000594092 FAM122BQ7Z309 247 aa13.65□□□□□ -0.22
VRK3-207ENST00000594092 SPACA3Q8IXA5 215 aa13.65□□□□□ -0.22
VRK3-207ENST00000594092 SCAIQ8N9R8 606 aa13.65□□□□□ -0.22
VRK3-207ENST00000594092 SCMH1Q96GD3 660 aa13.65□□□□□ -0.22
VRK3-207ENST00000594092 OR5B2Q96R09 309 aa13.65□□□□□ -0.22
VRK3-207ENST00000594092 TTTY12Q9BZ98 90 aa13.65□□□□□ -0.22
VRK3-207ENST00000594092 ZNF703Q9H7S9 590 aaPredicted RBP13.65□□□□□ -0.22
VRK3-207ENST00000594092 HDGFL3Q9Y3E1 203 aa13.65□□□□□ -0.22
VRK3-207ENST00000594092 CSAG2Q9Y5P2 127 aa13.65□□□□□ -0.22
VRK3-207ENST00000594092 FAM183AA6NL82 134 aa13.64□□□□□ -0.23
VRK3-207ENST00000594092 PRR23D1E9PI22 279 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms