RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 NANSQ9NR45 359 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 ANKRD10Q9NXR5 420 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 HCN3Q9P1Z3 774 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 CPNE7Q9UBL6 633 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 ARHGEF17Q96PE2 2063 aaPredicted RBP15.1■□□□□ 0.01
LIG1-206ENST00000594067 A0A087WV48 116 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 A0A0J9YY10 115 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 C4orf47A7E2U8 309 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 EGFP01133 1207 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 ACSM4P0C7M7 580 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 SPI1P17947 270 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 SRMP19623 302 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 PSMB1P20618 241 aaKnown RBP15.1■□□□□ 0.01
LIG1-206ENST00000594067 VEGFCP49767 419 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 CLDN12P56749 244 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 LGALS3BPQ08380 585 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 BAMBIQ13145 260 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 SFXN2Q96NB2 322 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 REG4Q9BYZ8 158 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 LMAN2LQ9H0V9 348 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 TCEAL2Q9H3H9 227 aaPredicted RBP15.1■□□□□ 0.01
LIG1-206ENST00000594067 FAM60AQ9NP50 221 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 RCE1Q9Y256 329 aa15.1■□□□□ 0.01
LIG1-206ENST00000594067 OR2W5A6NFC9 320 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 LINC01565O15544 149 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 ATF4P18848 351 aaPredicted RBP15.09■□□□□ 0.01
LIG1-206ENST00000594067 HNRNPA2B1P22626 353 aaKnown RBP15.09■□□□□ 0.01
LIG1-206ENST00000594067 NPSR1Q6W5P4 371 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 FRMD1Q8N878 549 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 RCBTB1Q8NDN9 531 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 PIGKQ92643 395 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 LCORQ96JN0 433 aaPredicted RBP15.09■□□□□ 0.01
LIG1-206ENST00000594067 LMF2Q9BU23 707 aaKnown RBP15.09■□□□□ 0.01
LIG1-206ENST00000594067 MFRPQ9BY79 579 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 CHIAQ9BZP6 476 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 OR10A4Q9H209 315 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 PPA2Q9H2U2 334 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 PIPOXQ9P0Z9 390 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 LRIT1Q9P2V4 623 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 KIF25Q9UIL4 384 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 ZNF346Q9UL40 294 aaKnown RBP15.09■□□□□ 0.01
LIG1-206ENST00000594067 KCNMB2Q9Y691 235 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 TUBAL3A6NHL2 446 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 TGFBR3LH3BV60 316 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 ATXN8OSP0DMR3 200 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 CXCL2P19875 107 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 ZNF542PQ5EBM4 170 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 FAM69AQ5T7M9 428 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 FAM199XQ6PEV8 388 aaPredicted RBP15.09■□□□□ 0.01
LIG1-206ENST00000594067 UNQ9370/PRO34162Q6UXP9 181 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 ZNF550Q7Z398 422 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 ASB12Q8WXK4 309 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 HOXB13Q92826 284 aaPredicted RBP15.09■□□□□ 0.01
LIG1-206ENST00000594067 RIT1Q92963 219 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 ELSPBP1Q96BH3 223 aa15.09■□□□□ 0.01
LIG1-206ENST00000594067 hCG_1807616A0A1W2PRN6 198 aa15.08■□□□□ 0
LIG1-206ENST00000594067 PLSCR5A0PG75 271 aa15.08■□□□□ 0
LIG1-206ENST00000594067 PRR32B1ATL7 298 aa15.08■□□□□ 0
LIG1-206ENST00000594067 ZNF879B4DU55 563 aa15.08■□□□□ 0
LIG1-206ENST00000594067 PRAF2O60831 178 aa15.08■□□□□ 0
LIG1-206ENST00000594067 ALDOBP05062 364 aa15.08■□□□□ 0
LIG1-206ENST00000594067 CELA2BP08218 269 aaPredicted RBP15.08■□□□□ 0
LIG1-206ENST00000594067 NANOS3P60323 173 aaKnown RBP15.08■□□□□ 0
LIG1-206ENST00000594067 RIPPLY1Q0D2K3 151 aa15.08■□□□□ 0
LIG1-206ENST00000594067 ILF3Q12906 894 aaKnown RBP eCLIP15.08■□□□□ 0
LIG1-206ENST00000594067 ERV3-1Q14264 604 aa15.08■□□□□ 0
LIG1-206ENST00000594067 FCRLAQ7L513 359 aa15.08■□□□□ 0
LIG1-206ENST00000594067 SLC43A2Q8N370 569 aa15.08■□□□□ 0
LIG1-206ENST00000594067 FAM71CQ8NEG0 241 aa15.08■□□□□ 0
LIG1-206ENST00000594067 OR52I2Q8NH67 350 aa15.08■□□□□ 0
LIG1-206ENST00000594067 TYRP1P17643 537 aa15.08■□□□□ 0
LIG1-206ENST00000594067 GPR143P51810 404 aa15.08■□□□□ 0
LIG1-206ENST00000594067 PGDP52209 483 aa15.08■□□□□ 0
LIG1-206ENST00000594067 DHODHQ02127 395 aa15.08■□□□□ 0
LIG1-206ENST00000594067 STPG1Q5TH74 334 aa15.08■□□□□ 0
LIG1-206ENST00000594067 METTL11BQ5VVY1 283 aa15.08■□□□□ 0
LIG1-206ENST00000594067 DPY19L2P2Q6ZN68 376 aa15.08■□□□□ 0
LIG1-206ENST00000594067 SLC25A38Q96DW6 304 aa15.08■□□□□ 0
LIG1-206ENST00000594067 VSTM2LQ96N03 204 aa15.08■□□□□ 0
LIG1-206ENST00000594067 LINC00052Q96N35 136 aa15.08■□□□□ 0
LIG1-206ENST00000594067 PLEKHA1Q9HB21 404 aa15.08■□□□□ 0
LIG1-206ENST00000594067 C12orf4Q9NQ89 552 aa15.08■□□□□ 0
LIG1-206ENST00000594067 A0A0A6YYC8 382 aaPredicted RBP15.07■□□□□ 0
LIG1-206ENST00000594067 A0A1B0GUH1 482 aa15.07■□□□□ 0
LIG1-206ENST00000594067 IFITM5A6NNB3 132 aa15.07■□□□□ 0
LIG1-206ENST00000594067 I3L1I5 382 aaPredicted RBP15.07■□□□□ 0
LIG1-206ENST00000594067 TSPAN4O14817 238 aa15.07■□□□□ 0
LIG1-206ENST00000594067 PRKNO60260 465 aaPredicted RBP15.07■□□□□ 0
LIG1-206ENST00000594067 RGS11O94810 467 aa15.07■□□□□ 0
LIG1-206ENST00000594067 RPP14O95059 124 aaKnown RBP15.07■□□□□ 0
LIG1-206ENST00000594067 CSTAP01040 98 aa15.07■□□□□ 0
LIG1-206ENST00000594067 PTHLHP12272 177 aa15.07■□□□□ 0
LIG1-206ENST00000594067 STX4Q12846 297 aa15.07■□□□□ 0
LIG1-206ENST00000594067 C3P1Q6ZMU1 363 aa15.07■□□□□ 0
LIG1-206ENST00000594067 OR4C3Q8NH37 302 aa15.07■□□□□ 0
LIG1-206ENST00000594067 MOSPD2Q8NHP6 518 aa15.07■□□□□ 0
LIG1-206ENST00000594067 RBM18Q96H35 190 aaKnown RBP15.07■□□□□ 0
LIG1-206ENST00000594067 LRFN5Q96NI6 719 aa15.07■□□□□ 0
LIG1-206ENST00000594067 SEC22CQ9BRL7 303 aa15.07■□□□□ 0
LIG1-206ENST00000594067 EVA1AQ9H8M9 152 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms