RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 ADIPOQQ15848 244 aa20.8■□□□□ 0.92
LSM4-202ENST00000593564 FAM166AQ6J272 317 aa20.8■□□□□ 0.92
LSM4-202ENST00000593564 ANKRD16Q6P6B7 361 aa20.8■□□□□ 0.92
LSM4-202ENST00000593564 SLC46A3Q7Z3Q1 461 aa20.8■□□□□ 0.92
LSM4-202ENST00000593564 SLC35B4Q969S0 331 aa20.8■□□□□ 0.92
LSM4-202ENST00000593564 PTDSS2Q9BVG9 487 aa20.8■□□□□ 0.92
LSM4-202ENST00000593564 PLK3Q9H4B4 646 aa20.8■□□□□ 0.92
LSM4-202ENST00000593564 KCNS2Q9ULS6 477 aa20.8■□□□□ 0.92
LSM4-202ENST00000593564 RCE1Q9Y256 329 aa20.8■□□□□ 0.92
LSM4-202ENST00000593564 A0A096LPE4 126 aa20.79■□□□□ 0.92
LSM4-202ENST00000593564 A0A1W2PPZ6 126 aa20.79■□□□□ 0.92
LSM4-202ENST00000593564 NR5A2O00482 541 aa20.79■□□□□ 0.92
LSM4-202ENST00000593564 FZD7O75084 574 aa20.79■□□□□ 0.92
LSM4-202ENST00000593564 OR4A8P0C604 315 aa20.79■□□□□ 0.92
LSM4-202ENST00000593564 PNMTP11086 282 aa20.79■□□□□ 0.92
LSM4-202ENST00000593564 IGFBP5P24593 272 aa20.79■□□□□ 0.92
LSM4-202ENST00000593564 ARIH2OSQ8N7S6 290 aa20.79■□□□□ 0.92
LSM4-202ENST00000593564 ANKK1Q8NFD2 765 aa20.79■□□□□ 0.92
LSM4-202ENST00000593564 OR4F15Q8NGB8 312 aa20.79■□□□□ 0.92
LSM4-202ENST00000593564 VPS33AQ96AX1 596 aa20.79■□□□□ 0.92
LSM4-202ENST00000593564 ZBTB9Q96C00 473 aa20.79■□□□□ 0.92
LSM4-202ENST00000593564 VRK1Q99986 396 aaPredicted RBP20.79■□□□□ 0.92
LSM4-202ENST00000593564 PRR14Q9BWN1 585 aa20.79■□□□□ 0.92
LSM4-202ENST00000593564 BCL2L10Q9HD36 194 aa20.79■□□□□ 0.92
LSM4-202ENST00000593564 TMEM120BA0PK00 339 aa20.78■□□□□ 0.92
LSM4-202ENST00000593564 RPL36A-HNRNPH2H7BZ11 118 aa20.78■□□□□ 0.92
LSM4-202ENST00000593564 ZNF432O94892 652 aa20.78■□□□□ 0.92
LSM4-202ENST00000593564 IGKV3-15P01624 115 aa20.78■□□□□ 0.92
LSM4-202ENST00000593564 TUBA1BP68363 451 aa20.78■□□□□ 0.92
LSM4-202ENST00000593564 TUBA4AP68366 448 aa20.78■□□□□ 0.92
LSM4-202ENST00000593564 ROR2Q01974 943 aaKnown RBP20.78■□□□□ 0.92
LSM4-202ENST00000593564 EGR4Q05215 589 aa20.78■□□□□ 0.92
LSM4-202ENST00000593564 SLC9B1Q4ZJI4 515 aa20.78■□□□□ 0.92
LSM4-202ENST00000593564 ZNF311Q5JNZ3 666 aa20.78■□□□□ 0.92
LSM4-202ENST00000593564 TUBA1AQ71U36 451 aa20.78■□□□□ 0.92
LSM4-202ENST00000593564 ANKS4BQ8N8V4 417 aa20.78■□□□□ 0.92
LSM4-202ENST00000593564 SLC25A36Q96CQ1 311 aa20.78■□□□□ 0.92
LSM4-202ENST00000593564 MSI2Q96DH6 328 aaKnown RBP20.78■□□□□ 0.92
LSM4-202ENST00000593564 FOXN4Q96NZ1 517 aa20.78■□□□□ 0.92
LSM4-202ENST00000593564 FBXO9Q9UK97 447 aaPredicted RBP20.78■□□□□ 0.92
LSM4-202ENST00000593564 RAB21Q9UL25 225 aa20.78■□□□□ 0.92
LSM4-202ENST00000593564 IGHV4-61A0A0C4DH41 118 aa20.77■□□□□ 0.92
LSM4-202ENST00000593564 LOC100289279A0A1B0GTE1 492 aa20.77■□□□□ 0.92
LSM4-202ENST00000593564 APEHP13798 732 aaKnown RBP20.77■□□□□ 0.92
LSM4-202ENST00000593564 ZNF43P17038 809 aa20.77■□□□□ 0.92
LSM4-202ENST00000593564 SRD5A1P18405 259 aa20.77■□□□□ 0.92
LSM4-202ENST00000593564 GTF2E2P29084 291 aaKnown RBP20.77■□□□□ 0.92
LSM4-202ENST00000593564 CALCRP30988 508 aa20.77■□□□□ 0.92
LSM4-202ENST00000593564 RPS5P46782 204 aaKnown RBP20.77■□□□□ 0.92
LSM4-202ENST00000593564 PPOXP50336 477 aa20.77■□□□□ 0.92
LSM4-202ENST00000593564 POLR2JP52435 117 aaKnown RBP20.77■□□□□ 0.92
LSM4-202ENST00000593564 CLDN17P56750 224 aa20.77■□□□□ 0.92
LSM4-202ENST00000593564 CARTPTQ16568 116 aa20.77■□□□□ 0.92
LSM4-202ENST00000593564 C6orf10Q5SRN2 563 aa20.77■□□□□ 0.92
LSM4-202ENST00000593564 ATG16L1Q676U5 607 aa20.77■□□□□ 0.92
LSM4-202ENST00000593564 C6orf89Q6UWU4 347 aa20.77■□□□□ 0.92
LSM4-202ENST00000593564 KDM8Q8N371 416 aa20.77■□□□□ 0.92
LSM4-202ENST00000593564 NUP37Q8NFH4 326 aa20.77■□□□□ 0.92
LSM4-202ENST00000593564 KTI12Q96EK9 354 aaPredicted RBP20.77■□□□□ 0.92
LSM4-202ENST00000593564 SEC61A2Q9H9S3 476 aa20.77■□□□□ 0.92
LSM4-202ENST00000593564 A4GALTQ9NPC4 353 aa20.77■□□□□ 0.92
LSM4-202ENST00000593564 SLC35F4A4IF30 521 aa20.76■□□□□ 0.91
LSM4-202ENST00000593564 NUDT7P0C024 238 aa20.76■□□□□ 0.91
LSM4-202ENST00000593564 BMP2P12643 396 aa20.76■□□□□ 0.91
LSM4-202ENST00000593564 IDH3GP51553 393 aaPredicted RBP20.76■□□□□ 0.91
LSM4-202ENST00000593564 HOXC5Q00444 222 aa20.76■□□□□ 0.91
LSM4-202ENST00000593564 RGNQ15493 299 aa20.76■□□□□ 0.91
LSM4-202ENST00000593564 KRTAP24-1Q3LI83 254 aa20.76■□□□□ 0.91
LSM4-202ENST00000593564 VHLLQ6RSH7 139 aa20.76■□□□□ 0.91
LSM4-202ENST00000593564 MAVSQ7Z434 540 aa20.76■□□□□ 0.91
LSM4-202ENST00000593564 ZNF540Q8NDQ6 660 aa20.76■□□□□ 0.91
LSM4-202ENST00000593564 OR9I1Q8NGQ6 314 aa20.76■□□□□ 0.91
LSM4-202ENST00000593564 BBS10Q8TAM1 723 aa20.76■□□□□ 0.91
LSM4-202ENST00000593564 MGARPQ8TDB4 240 aa20.76■□□□□ 0.91
LSM4-202ENST00000593564 OXGR1Q96P68 337 aa20.76■□□□□ 0.91
LSM4-202ENST00000593564 ZNF442Q9H7R0 627 aa20.76■□□□□ 0.91
LSM4-202ENST00000593564 CHODLQ9H9P2 273 aa20.76■□□□□ 0.91
LSM4-202ENST00000593564 C12orf10Q9HB07 376 aa20.76■□□□□ 0.91
LSM4-202ENST00000593564 B3GAT1Q9P2W7 334 aa20.76■□□□□ 0.91
LSM4-202ENST00000593564 SEC14L4Q9UDX3 406 aa20.76■□□□□ 0.91
LSM4-202ENST00000593564 UBDO15205 165 aa20.75■□□□□ 0.91
LSM4-202ENST00000593564 SLC43A1O75387 559 aa20.75■□□□□ 0.91
LSM4-202ENST00000593564 CBR1P16152 277 aa20.75■□□□□ 0.91
LSM4-202ENST00000593564 SLC18A1P54219 525 aa20.75■□□□□ 0.91
LSM4-202ENST00000593564 ARF1P84077 181 aaKnown RBP20.75■□□□□ 0.91
LSM4-202ENST00000593564 FADDQ13158 208 aa20.75■□□□□ 0.91
LSM4-202ENST00000593564 FAM120AOSQ5T036 256 aa20.75■□□□□ 0.91
LSM4-202ENST00000593564 GTF2H4Q92759 462 aa20.75■□□□□ 0.91
LSM4-202ENST00000593564 MAL2Q969L2 176 aa20.75■□□□□ 0.91
LSM4-202ENST00000593564 OR52B2Q96RD2 323 aa20.75■□□□□ 0.91
LSM4-202ENST00000593564 BPESC1Q9GZL8 116 aa20.75■□□□□ 0.91
LSM4-202ENST00000593564 PAIP1Q9H074 479 aaKnown RBP20.75■□□□□ 0.91
LSM4-202ENST00000593564 RAB1BQ9H0U4 201 aa20.75■□□□□ 0.91
LSM4-202ENST00000593564 RAD21L1Q9H4I0 556 aa20.75■□□□□ 0.91
LSM4-202ENST00000593564 PCDHB14Q9Y5E9 798 aa20.75■□□□□ 0.91
LSM4-202ENST00000593564 ANK2Q01484 3957 aa20.74■□□□□ 0.91
LSM4-202ENST00000593564 AIM2O14862 343 aa20.74■□□□□ 0.91
LSM4-202ENST00000593564 OR2T1O43869 369 aa20.74■□□□□ 0.91
LSM4-202ENST00000593564 ZNF23P17027 643 aa20.74■□□□□ 0.91
LSM4-202ENST00000593564 HGFACQ04756 655 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms