RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 POTEKPQ9BYX7 375 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 UPF3BQ9BZI7 483 aaKnown RBP4.08□□□□□ -1.76
SMAD4-216ENST00000593223 CEP295Q9C0D2 2601 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 PIEZO2Q9H5I5 2752 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 ASB8Q9H765 288 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 DCLRE1BQ9H816 532 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 SLC38A10Q9HBR0 1119 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 MCCC2Q9HCC0 563 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 LYRM4Q9HD34 91 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 PHPT1Q9NRX4 125 aaPredicted RBP4.08□□□□□ -1.76
SMAD4-216ENST00000593223 PSMC3IPQ9P2W1 217 aaPredicted RBP4.08□□□□□ -1.76
SMAD4-216ENST00000593223 ZNF639Q9UID6 485 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 NAGKQ9UJ70 344 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 VANGL2Q9ULK5 521 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 RBMX2Q9Y388 322 aaKnown RBP4.08□□□□□ -1.76
SMAD4-216ENST00000593223 PPIAL4AQ9Y536 164 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 NPTNQ9Y639 398 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 DSPP15924 2871 aaKnown RBP4.08□□□□□ -1.76
SMAD4-216ENST00000593223 UBR2Q8IWV8 1755 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 COL4A4P53420 1690 aaPredicted RBP4.07□□□□□ -1.76
SMAD4-216ENST00000593223 ITPR3Q14573 2671 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 IGSF10Q6WRI0 2623 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 TRBV11-1A0A0K0K1C0 115 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 SERPINE3A8MV23 424 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 MPTX1A8MV57 137 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 A8MVM7 634 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 E7ENQ6 273 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 DENRO43583 198 aaKnown RBP4.07□□□□□ -1.76
SMAD4-216ENST00000593223 TM7SF2O76062 418 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 SEMA3DO95025 777 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 FCER2P06734 321 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 OCMP0CE72 109 aaPredicted RBP4.07□□□□□ -1.76
SMAD4-216ENST00000593223 ACADSP16219 412 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 TNNI1P19237 187 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 TPSB2P20231 275 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 UQCRC2P22695 453 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 CFL1P23528 166 aaKnown RBP4.07□□□□□ -1.76
SMAD4-216ENST00000593223 FEN1P39748 380 aaKnown RBP4.07□□□□□ -1.76
SMAD4-216ENST00000593223 P2RY2P41231 377 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 OR3A1P47881 315 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 CLDN17P56750 224 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 SLC3A1Q07837 685 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 BST2Q10589 180 aaKnown RBP4.07□□□□□ -1.76
SMAD4-216ENST00000593223 NME3Q13232 169 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 PMS2P3Q13401 168 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 TPSAB1Q15661 275 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 ALX1Q15699 326 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 SLC1A5Q15758 541 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 LPAL2Q16609 132 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 STX1AQ16623 288 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 DUSP5Q16690 384 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 AGKQ53H12 422 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 CMPK2Q5EBM0 449 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 ATP1A1-AS1Q5TC04 95 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 LGSNQ5TDP6 509 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 TTC33Q6PID6 262 aaPredicted RBP4.07□□□□□ -1.76
SMAD4-216ENST00000593223 SIGLEC15Q6ZMC9 328 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 PLEKHG7Q6ZR37 379 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 FAM122BQ7Z309 247 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 CPEB2Q7Z5Q1 589 aaKnown RBP4.07□□□□□ -1.76
SMAD4-216ENST00000593223 LHFPL4Q7Z7J7 247 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 SLC26A11Q86WA9 606 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 SELENOHQ8IZQ5 122 aaKnown RBP4.07□□□□□ -1.76
SMAD4-216ENST00000593223 PRSS35Q8N3Z0 413 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 Q8NBF4 154 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 COLGALT1Q8NBJ5 622 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 AQP11Q8NBQ7 271 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 TMEM104Q8NE00 496 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 OR4A15Q8NGL6 344 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 CACNG8Q8WXS5 425 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 ST8SIA1Q92185 356 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 GTF3AQ92664 365 aaKnown RBP4.07□□□□□ -1.76
SMAD4-216ENST00000593223 ADIPOR1Q96A54 375 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 ECHDC3Q96DC8 303 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 NXPE2Q96DL1 559 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 ASB9Q96DX5 294 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 OMA1Q96E52 524 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 CNRIP1Q96F85 164 aaPredicted RBP4.07□□□□□ -1.76
SMAD4-216ENST00000593223 PELOQ9BRX2 385 aaKnown RBP4.07□□□□□ -1.76
SMAD4-216ENST00000593223 TEKT3Q9BXF9 490 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 PRRG3Q9BZD7 231 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 OPN3Q9H1Y3 402 aaPredicted RBP4.07□□□□□ -1.76
SMAD4-216ENST00000593223 ANKRA2Q9H9E1 313 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 ELOVL3Q9HB03 270 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 TREX1Q9NSU2 369 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 UFSP2Q9NUQ7 469 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 SMOXQ9NWM0 555 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 MS4A12Q9NXJ0 267 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 NDE1Q9NXR1 346 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 PLEK2Q9NYT0 353 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 ADA2Q9NZK5 511 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 POLKQ9UBT6 870 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 SLC7A8Q9UHI5 535 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 ZNF229Q9UJW7 825 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 NOCTQ9UK39 431 aaKnown RBP4.07□□□□□ -1.76
SMAD4-216ENST00000593223 RPH3ALQ9UNE2 315 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 FLVCR2Q9UPI3 526 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 WIPI2Q9Y4P8 454 aa4.07□□□□□ -1.76
SMAD4-216ENST00000593223 GBF1Q92538 1859 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms