RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 KLHL17Q6TDP4 642 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 THSD4Q6ZMP0 1018 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 ESPNLQ6ZVH7 1005 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 GALNT5Q7Z7M9 940 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 STK32CQ86UX6 486 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 GCNT2Q8N0V5 402 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 CBR4Q8N4T8 237 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 MEIOBQ8N635 442 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 IQCF1Q8N6M8 205 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 NAXEQ8NCW5 288 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 OR8D4Q8NGM9 314 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 OR51A7Q8NH64 312 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 OR5K1Q8NHB7 308 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 STK35Q8TDR2 534 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 GIPC3Q8TF64 312 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 SLC25A43Q8WUT9 341 aaPredicted RBP8.6□□□□□ -1.03
DDX39A-220ENST00000593008 CENPNQ96H22 339 aaPredicted RBP8.6□□□□□ -1.03
DDX39A-220ENST00000593008 FEVQ99581 238 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 ANKRD19PQ9H560 264 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 EGLN3Q9H6Z9 239 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 YY1AP1Q9H869 796 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 RNPEPL1Q9HAU8 725 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 MCCC2Q9HCC0 563 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 B3GAT1Q9P2W7 334 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 CLCF1Q9UBD9 225 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 Q9UFV3 132 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 TMCC3Q9ULS5 477 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 SPIN1Q9Y657 262 aaPredicted RBP8.6□□□□□ -1.03
DDX39A-220ENST00000593008 TEX15Q9BXT5 2789 aa8.6□□□□□ -1.03
DDX39A-220ENST00000593008 ITPR2Q14571 2701 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 AHRRA9YTQ3 701 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 C11orf98E9PRG8 122 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 M0R129 80 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 IMPA2O14732 288 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 TOXO94900 526 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 ASAH2BP0C7U1 165 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 SAGP10523 405 aaPredicted RBP8.59□□□□□ -1.03
DDX39A-220ENST00000593008 FCGR1AP12314 374 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 PRF1P14222 555 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 COX6B1P14854 86 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 GABRA1P14867 456 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 EPHA2P29317 976 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 IFNA8P32881 189 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 NTF4P34130 210 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 AGFG1P52594 562 aaKnown RBP8.59□□□□□ -1.03
DDX39A-220ENST00000593008 CARD18P57730 90 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 IL1RL1Q01638 556 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 RPL18Q07020 188 aaKnown RBP8.59□□□□□ -1.03
DDX39A-220ENST00000593008 LGALS3BPQ08380 585 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 FOXF2Q12947 444 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 FAM69AQ5T7M9 428 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 ABLIM2Q6H8Q1 611 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 FAHD1Q6P587 224 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 ADGRE4PQ86SQ3 457 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 LIX1LQ8IVB5 337 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 C10orf67Q8IYJ2 551 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 LILRB4Q8NHJ6 448 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 ASB5Q8WWX0 329 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 TNFRSF13CQ96RJ3 184 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 POTEKPQ9BYX7 375 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 GABARAPL1Q9H0R8 117 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 CHST11Q9NPF2 352 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 REV1Q9UBZ9 1251 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 TMEFF2Q9UIK5 374 aaPredicted RBP8.59□□□□□ -1.03
DDX39A-220ENST00000593008 HDGFL3Q9Y3E1 203 aa8.59□□□□□ -1.03
DDX39A-220ENST00000593008 UNC119BA6NIH7 251 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 SLC22A20A6NK97 555 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 AQP7P3A6NL99 342 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 GJE1A6NN92 205 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 ZNF716A6NP11 495 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 MCIDASD6RGH6 385 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 G3V2T6 193 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 FZD7O75084 574 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 PMS2P2O95744 297 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 F13BP05160 661 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 FPR3P25089 353 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 UQCRC1P31930 480 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 POLR2IP36954 125 aaKnown RBP8.58□□□□□ -1.04
DDX39A-220ENST00000593008 SLC9A3P48764 834 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 MAP2K6P52564 334 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 SMIM11AP58511 58 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 RPS4XP62701 263 aaKnown RBP8.58□□□□□ -1.04
DDX39A-220ENST00000593008 SIRPAP78324 504 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 PPP2R2BQ00005 443 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 TOP3AQ13472 1001 aaPredicted RBP8.58□□□□□ -1.04
DDX39A-220ENST00000593008 MELKQ14680 651 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 BCL2A1Q16548 175 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 SGCBQ16585 318 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 CLEC12AQ5QGZ9 265 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 PDSS1Q5T2R2 415 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 C1orf94Q6P1W5 598 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 FCRLAQ7L513 359 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 CHMP1BQ7LBR1 199 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 NANOGNBQ7Z5D8 188 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 GPAT4Q86UL3 456 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 PM20D2Q8IYS1 436 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 GALNT4Q8N4A0 578 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 CLDN22Q8N7P3 220 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 ATG16L2Q8NAA4 619 aa8.58□□□□□ -1.04
DDX39A-220ENST00000593008 OR4Q3Q8NH05 313 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms