RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 EVPLLA8MZ36 301 aa20.33■□□□□ 0.85
MBD3-211ENST00000592965 H7C417 338 aa20.33■□□□□ 0.85
MBD3-211ENST00000592965 AIM2O14862 343 aa20.33■□□□□ 0.85
MBD3-211ENST00000592965 TPST1O60507 370 aa20.33■□□□□ 0.85
MBD3-211ENST00000592965 SLC6A2P23975 617 aa20.33■□□□□ 0.85
MBD3-211ENST00000592965 NUDT6P53370 316 aa20.33■□□□□ 0.85
MBD3-211ENST00000592965 SH3BGRP55822 239 aaPredicted RBP20.33■□□□□ 0.85
MBD3-211ENST00000592965 SCARB2Q14108 478 aa20.33■□□□□ 0.85
MBD3-211ENST00000592965 ADRM1Q16186 407 aa20.33■□□□□ 0.85
MBD3-211ENST00000592965 FAM69AQ5T7M9 428 aa20.33■□□□□ 0.85
MBD3-211ENST00000592965 FAM91A1Q658Y4 838 aa20.33■□□□□ 0.85
MBD3-211ENST00000592965 DLEU7Q6UYE1 221 aa20.33■□□□□ 0.85
MBD3-211ENST00000592965 LINGO2Q7L985 606 aa20.33■□□□□ 0.85
MBD3-211ENST00000592965 PRIMA1Q86XR5 153 aa20.33■□□□□ 0.85
MBD3-211ENST00000592965 BHLHE22Q8NFJ8 381 aaPredicted RBP20.33■□□□□ 0.85
MBD3-211ENST00000592965 MAGEE2Q8TD90 523 aaPredicted RBP20.33■□□□□ 0.85
MBD3-211ENST00000592965 INTS9Q9NV88 658 aaKnown RBP20.33■□□□□ 0.85
MBD3-211ENST00000592965 B3GAT1Q9P2W7 334 aa20.33■□□□□ 0.85
MBD3-211ENST00000592965 TESQ9UGI8 421 aaKnown RBP20.33■□□□□ 0.85
MBD3-211ENST00000592965 ATP23Q9Y6H3 246 aa20.33■□□□□ 0.85
MBD3-211ENST00000592965 TRAV36DV7A0A075B6V5 113 aa20.32■□□□□ 0.84
MBD3-211ENST00000592965 HMGB1P1B2RPK0 211 aaPredicted RBP20.32■□□□□ 0.84
MBD3-211ENST00000592965 ATP6V1G2-DDX39BF2Z307 99 aa20.32■□□□□ 0.84
MBD3-211ENST00000592965 SSX4O60224 188 aa20.32■□□□□ 0.84
MBD3-211ENST00000592965 UPK3AO75631 287 aa20.32■□□□□ 0.84
MBD3-211ENST00000592965 SASH3O75995 380 aa20.32■□□□□ 0.84
MBD3-211ENST00000592965 ZNF432O94892 652 aa20.32■□□□□ 0.84
MBD3-211ENST00000592965 ZNF43P17038 809 aa20.32■□□□□ 0.84
MBD3-211ENST00000592965 GLIPR1L2Q4G1C9 344 aa20.32■□□□□ 0.84
MBD3-211ENST00000592965 ALG10BQ5I7T1 473 aa20.32■□□□□ 0.84
MBD3-211ENST00000592965 ULK3Q6PHR2 472 aa20.32■□□□□ 0.84
MBD3-211ENST00000592965 KDM8Q8N371 416 aa20.32■□□□□ 0.84
MBD3-211ENST00000592965 ANKK1Q8NFD2 765 aa20.32■□□□□ 0.84
MBD3-211ENST00000592965 BCL2L2Q92843 193 aaPredicted RBP20.32■□□□□ 0.84
MBD3-211ENST00000592965 TAAR8Q969N4 342 aa20.32■□□□□ 0.84
MBD3-211ENST00000592965 OXGR1Q96P68 337 aa20.32■□□□□ 0.84
MBD3-211ENST00000592965 ZNF607Q96SK3 696 aa20.32■□□□□ 0.84
MBD3-211ENST00000592965 KLHL14Q9P2G3 628 aa20.32■□□□□ 0.84
MBD3-211ENST00000592965 SEC14L4Q9UDX3 406 aa20.32■□□□□ 0.84
MBD3-211ENST00000592965 ARPC4-TTLL3A0A0A6YYG9 625 aa20.31■□□□□ 0.84
MBD3-211ENST00000592965 M0R082 166 aa20.31■□□□□ 0.84
MBD3-211ENST00000592965 SERPINB7O75635 380 aa20.31■□□□□ 0.84
MBD3-211ENST00000592965 CLDN17P56750 224 aa20.31■□□□□ 0.84
MBD3-211ENST00000592965 RGS8P57771 180 aaPredicted RBP20.31■□□□□ 0.84
MBD3-211ENST00000592965 DSCR9P59020 149 aa20.31■□□□□ 0.84
MBD3-211ENST00000592965 NCALDP61601 193 aa20.31■□□□□ 0.84
MBD3-211ENST00000592965 HMBOX1Q6NT76 420 aa20.31■□□□□ 0.84
MBD3-211ENST00000592965 HDXQ7Z353 690 aa20.31■□□□□ 0.84
MBD3-211ENST00000592965 NET1Q7Z628 596 aaPredicted RBP20.31■□□□□ 0.84
MBD3-211ENST00000592965 ADPRHL1Q8NDY3 354 aa20.31■□□□□ 0.84
MBD3-211ENST00000592965 HIPK4Q8NE63 616 aa20.31■□□□□ 0.84
MBD3-211ENST00000592965 OR10H5Q8NGA6 315 aa20.31■□□□□ 0.84
MBD3-211ENST00000592965 ZNF417Q8TAU3 575 aa20.31■□□□□ 0.84
MBD3-211ENST00000592965 CKAP2Q8WWK9 683 aa20.31■□□□□ 0.84
MBD3-211ENST00000592965 SLC47A1Q96FL8 570 aa20.31■□□□□ 0.84
MBD3-211ENST00000592965 MAGEB18Q96M61 343 aa20.31■□□□□ 0.84
MBD3-211ENST00000592965 SLC38A2Q96QD8 506 aa20.31■□□□□ 0.84
MBD3-211ENST00000592965 ZNF587Q96SQ5 575 aaPredicted RBP20.31■□□□□ 0.84
MBD3-211ENST00000592965 RHNO1Q9BSD3 238 aa20.31■□□□□ 0.84
MBD3-211ENST00000592965 ZNF385DQ9H6B1 395 aa20.31■□□□□ 0.84
MBD3-211ENST00000592965 EVA1AQ9H8M9 152 aa20.31■□□□□ 0.84
MBD3-211ENST00000592965 MOV10Q9HCE1 1003 aaKnown RBP20.31■□□□□ 0.84
MBD3-211ENST00000592965 IGHV4-30-2A0A087WSY4 118 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 IGHV1-18A0A0C4DH31 117 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 LOC102725191A0A1B0GVB3 256 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 RPL36A-HNRNPH2H7BZ11 118 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 BMP4P12644 408 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 GRPRP30550 384 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 APOBEC3AP31941 199 aaPredicted RBP20.3■□□□□ 0.84
MBD3-211ENST00000592965 UBE2NP61088 152 aaKnown RBP20.3■□□□□ 0.84
MBD3-211ENST00000592965 ROR2Q01974 943 aaKnown RBP20.3■□□□□ 0.84
MBD3-211ENST00000592965 CHRNB3Q05901 458 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 RAB35Q15286 201 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 C3orf36Q3SXR2 165 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 RUNDC3AQ59EK9 446 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 ANKRD16Q6P6B7 361 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 CLEC2AQ6UVW9 174 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 H1FNTQ75WM6 255 aaPredicted RBP20.3■□□□□ 0.84
MBD3-211ENST00000592965 ARMC8Q8IUR7 673 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 DPP10Q8N608 796 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 OR6S1Q8NH40 331 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 KATNB1Q9BVA0 655 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 NELFAQ9H3P2 528 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 CRNNQ9UBG3 495 aaPredicted RBP20.3■□□□□ 0.84
MBD3-211ENST00000592965 LEF1Q9UJU2 399 aaPredicted RBP20.3■□□□□ 0.84
MBD3-211ENST00000592965 SLC13A4Q9UKG4 626 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 MOKQ9UQ07 419 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 ANGPT4Q9Y264 503 aa20.3■□□□□ 0.84
MBD3-211ENST00000592965 YLPM1P49750 1951 aaKnown RBP20.3■□□□□ 0.84
MBD3-211ENST00000592965 MXRA5Q9NR99 2828 aa20.29■□□□□ 0.84
MBD3-211ENST00000592965 A0A087WUJ7 227 aa20.29■□□□□ 0.84
MBD3-211ENST00000592965 A0A0B4J2E0 115 aa20.29■□□□□ 0.84
MBD3-211ENST00000592965 A0A1B0GX12 115 aa20.29■□□□□ 0.84
MBD3-211ENST00000592965 SLC43A1O75387 559 aa20.29■□□□□ 0.84
MBD3-211ENST00000592965 TP53P04637 393 aaPredicted RBP20.29■□□□□ 0.84
MBD3-211ENST00000592965 HOXB1P14653 301 aaPredicted RBP20.29■□□□□ 0.84
MBD3-211ENST00000592965 AQP1P29972 269 aa20.29■□□□□ 0.84
MBD3-211ENST00000592965 PCBP3P57721 371 aaKnown RBP20.29■□□□□ 0.84
MBD3-211ENST00000592965 MFSD13AQ14CX5 517 aa20.29■□□□□ 0.84
MBD3-211ENST00000592965 SWT1Q5T5J6 900 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms