RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 TSPO2Q5TGU0 170 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 HMBOX1Q6NT76 420 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 CLEC2AQ6UVW9 174 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 B3GLCTQ6Y288 498 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 LSRQ86X29 649 aaPredicted RBP9.1□□□□□ -0.95
VPS4B-207ENST00000591519 PEX5LQ8IYB4 626 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 POMGNT2Q8NAT1 580 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 WDR60Q8WVS4 1066 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 PROX1Q92786 737 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 DNAJA3Q96EY1 480 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 ZNF317Q96PQ6 595 aaPredicted RBP9.1□□□□□ -0.95
VPS4B-207ENST00000591519 C1QTNF6Q9BXI9 259 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 FKRPQ9H9S5 495 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 OBP2BQ9NPH6 170 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 SLC52A3Q9NQ40 469 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 TMEM160Q9NX00 188 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 SLC25A37Q9NYZ2 338 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 POU2F3Q9UKI9 436 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 FBN3Q75N90 2809 aa9.1□□□□□ -0.95
VPS4B-207ENST00000591519 AQP7P3A6NL99 342 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 M0R1B8 84 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 ANGPT2O15123 496 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 NPIPB7O75200 414 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 VAMP5O95183 116 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 BCHEP06276 602 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 GPIP06744 558 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 SLC25A16P16260 332 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 P2RY4P51582 365 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 EFNA4P52798 201 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 GNGT1P63211 74 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 VLDLRP98155 873 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 SLC25A3Q00325 362 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 CHRNB3Q05901 458 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 SPOCK1Q08629 439 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 CEACAM7Q14002 265 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 SWI5Q1ZZU3 235 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 TMEM249Q2WGJ8 235 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 OTUD3Q5T2D3 398 aaPredicted RBP9.09□□□□□ -0.95
VPS4B-207ENST00000591519 CASP12Q6UXS9 341 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 AAED1Q7RTV5 226 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 DHDDSQ86SQ9 333 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 MSRB3Q8IXL7 192 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 TMEM99Q8N816 258 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 OR9K2Q8NGE7 335 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 C10orf82Q8WW14 230 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 STON2Q8WXE9 905 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 ZNF385AQ96PM9 386 aaKnown RBP9.09□□□□□ -0.95
VPS4B-207ENST00000591519 ELAC2Q9BQ52 826 aaKnown RBP9.09□□□□□ -0.95
VPS4B-207ENST00000591519 RLIMQ9NVW2 624 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 CALML5Q9NZT1 146 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 VAPAQ9P0L0 249 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 ARMCX1Q9P291 453 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 KLHL14Q9P2G3 628 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 LEF1Q9UJU2 399 aaPredicted RBP9.09□□□□□ -0.95
VPS4B-207ENST00000591519 NDUFAF1Q9Y375 327 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 PMF1-BGLAPU3KQ54 211 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 MXRA5Q9NR99 2828 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 ANK3Q12955 4377 aaKnown RBP9.09□□□□□ -0.95
VPS4B-207ENST00000591519 ARFGEF3Q5TH69 2177 aa9.09□□□□□ -0.95
VPS4B-207ENST00000591519 OR6C65A6NJZ3 312 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 A8MVM7 634 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 AKR7A3O95154 331 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 WNT11O96014 354 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 CSF3P09919 207 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 HOXB9P17482 250 aaPredicted RBP9.08□□□□□ -0.96
VPS4B-207ENST00000591519 CXCR1P25024 350 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 KLF10Q13118 480 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 NFYCQ13952 458 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 RGNQ15493 299 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 C3orf36Q3SXR2 165 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 CHRFAM7AQ494W8 412 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 MMEL1Q495T6 779 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 C6orf52Q5T4I8 152 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 RNF220Q5VTB9 566 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 TMEM225Q6GV28 225 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 WBP2NLQ6ICG8 309 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 CREB3L2Q70SY1 520 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 ABHD12BQ7Z5M8 362 aaPredicted RBP9.08□□□□□ -0.96
VPS4B-207ENST00000591519 C10orf111Q8N326 155 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 CLIP4Q8N3C7 705 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 OR52P1PQ8NH57 321 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 C10orf105Q8TEF2 133 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 SLC38A5Q8WUX1 472 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 FAM168AQ92567 244 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 MAL2Q969L2 176 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 TMEM19Q96HH6 336 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 RAD21L1Q9H4I0 556 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 IKZF5Q9H5V7 419 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 SAR1AQ9NR31 198 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 TMEM45AQ9NWC5 275 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 THUMPD1Q9NXG2 353 aaKnown RBP9.08□□□□□ -0.96
VPS4B-207ENST00000591519 P2RX2Q9UBL9 471 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 CDC42EP3Q9UKI2 254 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 ZNF232Q9UNY5 417 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 CHST2Q9Y4C5 530 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 ATP23Q9Y6H3 246 aa9.08□□□□□ -0.96
VPS4B-207ENST00000591519 A0A0G2JPF8 293 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 LOC100653049A0A140TA62 436 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 TMEM247A6NEH6 219 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 VWC2LB2RUY7 222 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms