RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 MBD6Q96DN6 1003 aa16.02■□□□□ 0.16
DDX39A-212ENST00000590260 MUS81Q96NY9 551 aa16.02■□□□□ 0.16
DDX39A-212ENST00000590260 FOXC2Q99958 501 aa16.02■□□□□ 0.16
DDX39A-212ENST00000590260 HOPXQ9BPY8 73 aaPredicted RBP16.02■□□□□ 0.16
DDX39A-212ENST00000590260 EFCAB1Q9HAE3 211 aa16.02■□□□□ 0.16
DDX39A-212ENST00000590260 PARPBPQ9NWS1 579 aa16.02■□□□□ 0.16
DDX39A-212ENST00000590260 FAM53CQ9NYF3 392 aa16.02■□□□□ 0.16
DDX39A-212ENST00000590260 SLC7A7Q9UM01 511 aa16.02■□□□□ 0.16
DDX39A-212ENST00000590260 SLC25A15Q9Y619 301 aa16.02■□□□□ 0.16
DDX39A-212ENST00000590260 TRAPPC13A5PLN9 417 aa16.01■□□□□ 0.15
DDX39A-212ENST00000590260 OR2T1O43869 369 aa16.01■□□□□ 0.15
DDX39A-212ENST00000590260 UPK3AO75631 287 aa16.01■□□□□ 0.15
DDX39A-212ENST00000590260 GGT1P19440 569 aa16.01■□□□□ 0.15
DDX39A-212ENST00000590260 PRDX6P30041 224 aa16.01■□□□□ 0.15
DDX39A-212ENST00000590260 STK11Q15831 433 aa16.01■□□□□ 0.15
DDX39A-212ENST00000590260 TIMM23BQ5SRD1 257 aa16.01■□□□□ 0.15
DDX39A-212ENST00000590260 ZNF704Q6ZNC4 412 aaPredicted RBP16.01■□□□□ 0.15
DDX39A-212ENST00000590260 H1FNTQ75WM6 255 aaPredicted RBP16.01■□□□□ 0.15
DDX39A-212ENST00000590260 ARPINQ7Z6K5 226 aa16.01■□□□□ 0.15
DDX39A-212ENST00000590260 KRTAP1-3Q8IUG1 177 aa16.01■□□□□ 0.15
DDX39A-212ENST00000590260 NKAIN4Q8IVV8 208 aa16.01■□□□□ 0.15
DDX39A-212ENST00000590260 ADPRHL1Q8NDY3 354 aa16.01■□□□□ 0.15
DDX39A-212ENST00000590260 RASSF5Q8WWW0 418 aa16.01■□□□□ 0.15
DDX39A-212ENST00000590260 NEUROG1Q92886 237 aa16.01■□□□□ 0.15
DDX39A-212ENST00000590260 OXGR1Q96P68 337 aa16.01■□□□□ 0.15
DDX39A-212ENST00000590260 NSRP1Q9H0G5 558 aaKnown RBP16.01■□□□□ 0.15
DDX39A-212ENST00000590260 SLCO5A1Q9H2Y9 848 aa16.01■□□□□ 0.15
DDX39A-212ENST00000590260 MEPEQ9NQ76 525 aaPredicted RBP16.01■□□□□ 0.15
DDX39A-212ENST00000590260 TAS2R16Q9NYV7 291 aa16.01■□□□□ 0.15
DDX39A-212ENST00000590260 B3GALT5Q9Y2C3 310 aa16.01■□□□□ 0.15
DDX39A-212ENST00000590260 PRRC2AP48634 2157 aaKnown RBP16■□□□□ 0.15
DDX39A-212ENST00000590260 LOC102725191A0A1B0GVB3 256 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 DNASE1P24855 282 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 CLDN17P56750 224 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 PSME3P61289 254 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 SELENOWP63302 87 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 PIN1Q13526 163 aaPredicted RBP16■□□□□ 0.15
DDX39A-212ENST00000590260 PPA1Q15181 289 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 ACKR1Q16570 336 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 DEFB113Q30KQ7 82 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 PHYHD1Q5SRE7 291 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 NIPAL3Q6P499 406 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 SLC46A3Q7Z3Q1 461 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 TSEN54Q7Z6J9 526 aaKnown RBP16■□□□□ 0.15
DDX39A-212ENST00000590260 VTCN1Q7Z7D3 282 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 TMEM123Q8N131 208 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 LRRC17Q8N6Y2 441 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 PROX1Q92786 737 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 NELFAQ9H3P2 528 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 ALG2Q9H553 416 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 UBTD1Q9HAC8 227 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 ARL8BQ9NVJ2 186 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 MRPL39Q9NYK5 338 aaKnown RBP16■□□□□ 0.15
DDX39A-212ENST00000590260 BAG5Q9UL15 447 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 SNX13Q9Y5W8 968 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 HIVEP1P15822 2718 aa16■□□□□ 0.15
DDX39A-212ENST00000590260 CXCR6O00574 342 aa15.99■□□□□ 0.15
DDX39A-212ENST00000590260 PLPP3O14495 311 aa15.99■□□□□ 0.15
DDX39A-212ENST00000590260 NCK1P16333 377 aa15.99■□□□□ 0.15
DDX39A-212ENST00000590260 UGT2B15P54855 530 aa15.99■□□□□ 0.15
DDX39A-212ENST00000590260 LSM11P83369 360 aaKnown RBP eCLIP15.99■□□□□ 0.15
DDX39A-212ENST00000590260 BSPH1Q075Z2 132 aa15.99■□□□□ 0.15
DDX39A-212ENST00000590260 ZNF74Q16587 644 aa15.99■□□□□ 0.15
DDX39A-212ENST00000590260 DEF8Q6ZN54 512 aa15.99■□□□□ 0.15
DDX39A-212ENST00000590260 SCAIQ8N9R8 606 aa15.99■□□□□ 0.15
DDX39A-212ENST00000590260 OR52N5Q8NH56 324 aa15.99■□□□□ 0.15
DDX39A-212ENST00000590260 TMEM255BQ8WV15 326 aa15.99■□□□□ 0.15
DDX39A-212ENST00000590260 CMTM5Q96DZ9 223 aa15.99■□□□□ 0.15
DDX39A-212ENST00000590260 ZNF837Q96EG3 531 aaPredicted RBP15.99■□□□□ 0.15
DDX39A-212ENST00000590260 BOD1Q96IK1 185 aa15.99■□□□□ 0.15
DDX39A-212ENST00000590260 TXNDC15Q96J42 360 aa15.99■□□□□ 0.15
DDX39A-212ENST00000590260 ALKBH3Q96Q83 286 aaPredicted RBP15.99■□□□□ 0.15
DDX39A-212ENST00000590260 USB1Q9BQ65 265 aaKnown RBP15.99■□□□□ 0.15
DDX39A-212ENST00000590260 SELENONQ9NZV5 590 aa15.99■□□□□ 0.15
DDX39A-212ENST00000590260 UPB1Q9UBR1 384 aa15.99■□□□□ 0.15
DDX39A-212ENST00000590260 A4GNTQ9UNA3 340 aa15.99■□□□□ 0.15
DDX39A-212ENST00000590260 KPNA4O00629 521 aaPredicted RBP15.98■□□□□ 0.15
DDX39A-212ENST00000590260 ZNF43P17038 809 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 MPGP29372 298 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 NR1H2P55055 460 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 KEAP1Q14145 624 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 P2RY8Q86VZ1 359 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 POMGNT2Q8NAT1 580 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 RBM15BQ8NDT2 890 aaKnown RBP15.98■□□□□ 0.15
DDX39A-212ENST00000590260 KBTBD8Q8NFY9 601 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 PFN4Q8NHR9 129 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 TPD52L3Q96J77 140 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 MPP4Q96JB8 637 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 ALPK1Q96QP1 1244 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 OR2M2Q96R28 347 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 EPYCQ99645 322 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 LINC00470Q9BZP3 86 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 SLC17A5Q9NRA2 495 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 TAS2R5Q9NYW4 299 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 RIMS3Q9UJD0 308 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 RCE1Q9Y256 329 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 AP3M1Q9Y2T2 418 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 ARL2BPQ9Y2Y0 163 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 CORINQ9Y5Q5 1042 aa15.98■□□□□ 0.15
DDX39A-212ENST00000590260 CIB4A0PJX0 185 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms