RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 USP22Q9UPT9 525 aa6.89□□□□□ -1.31
SMAD4-209ENST00000589941 SH2B3Q9UQQ2 575 aa6.89□□□□□ -1.31
SMAD4-209ENST00000589941 LIPT1Q9Y234 373 aa6.89□□□□□ -1.31
SMAD4-209ENST00000589941 CRYL1Q9Y2S2 319 aa6.89□□□□□ -1.31
SMAD4-209ENST00000589941 TMED5Q9Y3A6 229 aa6.89□□□□□ -1.31
SMAD4-209ENST00000589941 A3GALT2U3KPV4 340 aa6.89□□□□□ -1.31
SMAD4-209ENST00000589941 COL7A1Q02388 2944 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 HYDINQ4G0P3 5121 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 VWC2LB2RUY7 222 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 C9JVG2 144 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 SSX4O60224 188 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 KIAA0513O60268 411 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 OR10H2O60403 315 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 SEMG1P04279 462 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 RPN2P04844 631 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 DANCRP0C864 163 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 RPS3P23396 243 aaKnown RBP eCLIP6.88□□□□□ -1.31
SMAD4-209ENST00000589941 UGT2B10P36537 528 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 YAP1P46937 504 aaKnown RBP6.88□□□□□ -1.31
SMAD4-209ENST00000589941 UCP3P55916 312 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 LOXL1Q08397 574 aaPredicted RBP6.88□□□□□ -1.31
SMAD4-209ENST00000589941 TTLL9Q3SXZ7 439 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 ATP6AP1LQ52LC2 224 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 RUNDC3AQ59EK9 446 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 CDKL4Q5MAI5 379 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 CTSL3PQ5NE16 218 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 SYT6Q5T7P8 510 aaPredicted RBP6.88□□□□□ -1.31
SMAD4-209ENST00000589941 CYB5R2Q6BCY4 276 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 CAPN13Q6MZZ7 669 aaPredicted RBP6.88□□□□□ -1.31
SMAD4-209ENST00000589941 C16orf87Q6PH81 154 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 ZNF474Q6S9Z5 364 aaPredicted RBP6.88□□□□□ -1.31
SMAD4-209ENST00000589941 QSOX2Q6ZRP7 698 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 MSANTD1Q6ZTZ1 278 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 GPSM1Q86YR5 675 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 GPALPP1Q8IXQ4 340 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 MICU2Q8IYU8 434 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 TOR1AIP2Q8NFQ8 470 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 DYNC2LI1Q8TCX1 351 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 HTRA1Q92743 480 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 EFHD2Q96C19 240 aaPredicted RBP6.88□□□□□ -1.31
SMAD4-209ENST00000589941 WDYHV1Q96HA8 205 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 PPP3R2Q96LZ3 170 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 ZNF300Q96RE9 604 aaPredicted RBP6.88□□□□□ -1.31
SMAD4-209ENST00000589941 GPR21Q99679 349 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 PITX2Q99697 317 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 SH3GL1Q99961 368 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 TMEM204Q9BSN7 226 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 OPN3Q9H1Y3 402 aaPredicted RBP6.88□□□□□ -1.31
SMAD4-209ENST00000589941 ACKR4Q9NPB9 350 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 DCAF13Q9NV06 445 aaKnown RBP6.88□□□□□ -1.31
SMAD4-209ENST00000589941 ATAD3AQ9NVI7 634 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 SELENONQ9NZV5 590 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 TIMM22Q9Y584 194 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 CLDN16Q9Y5I7 305 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 CADP27708 2225 aa6.88□□□□□ -1.31
SMAD4-209ENST00000589941 A0A096LPI6 279 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 A0A1W2PNV4 684 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 ZNF99A8MXY4 864 aaPredicted RBP6.87□□□□□ -1.31
SMAD4-209ENST00000589941 C4orf51C9J302 202 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 G3V2T6 193 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 J3QRK9 145 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 OR7A17O14581 309 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 MGST3O14880 152 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 PFDN6O15212 129 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 CHST10O43529 356 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 TMCC2O75069 709 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 OR4F21O95013 312 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 P04436 131 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 IL6P05231 212 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 CHRM2P08172 466 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 OR56A5P0C7T3 313 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 G6PDP11413 515 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 IL7RP16871 459 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 EFNA1P20827 205 aaPredicted RBP6.87□□□□□ -1.31
SMAD4-209ENST00000589941 PRPH2P23942 346 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 GDF1P27539 372 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 HPCAL1P37235 193 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 CD79BP40259 229 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 TTPAP49638 278 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 HTR6P50406 440 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 RAD23AP54725 363 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 SLC35A2P78381 396 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 MAD2L1Q13257 205 aaPredicted RBP6.87□□□□□ -1.31
SMAD4-209ENST00000589941 GBX1Q14549 363 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 SHQ1Q6PI26 577 aaKnown RBP6.87□□□□□ -1.31
SMAD4-209ENST00000589941 SBSNQ6UWP8 590 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 TMEM108Q6UXF1 575 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 ADAMTSL2Q86TH1 951 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 LRRC17Q8N6Y2 441 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 FAM86B1Q8N7N1 296 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 FNDC5Q8NAU1 212 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 SETD9Q8NE22 299 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 ZNF555Q8NEP9 628 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 BPIFB6Q8NFQ5 453 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 OR2T12Q8NG77 320 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 OR6Q1Q8NGQ2 317 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 SLC13A3Q8WWT9 602 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 EXT2Q93063 718 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 RAD51AP1Q96B01 352 aa6.87□□□□□ -1.31
SMAD4-209ENST00000589941 FBXL8Q96CD0 374 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms