RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 GPR171O14626 319 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 LRRTM2O43300 516 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 GASTP01350 101 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 TMIGD3P0DMS9 266 aaPredicted RBP12.15□□□□□ -0.46
VMP1-210ENST00000589823 FPR3P25089 353 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 P2RY4P51582 365 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 PUDPQ08623 228 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 TSPAN31Q12999 210 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 PDK3Q15120 406 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 ANKDD1AQ495B1 522 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 ZBED5Q49AG3 693 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 ZNF770Q6IQ21 691 aaPredicted RBP12.15□□□□□ -0.46
VMP1-210ENST00000589823 SEM1Q6ZVN7 128 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 GCNT2Q8N0V5 402 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 ATG16L2Q8NAA4 619 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 OR13C2Q8NGS9 318 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 GTPBP3Q969Y2 492 aaKnown RBP12.15□□□□□ -0.46
VMP1-210ENST00000589823 INTS12Q96CB8 462 aaKnown RBP12.15□□□□□ -0.46
VMP1-210ENST00000589823 GMPPAQ96IJ6 420 aaPredicted RBP12.15□□□□□ -0.46
VMP1-210ENST00000589823 OXGR1Q96P68 337 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 FEVQ99581 238 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 PSD2Q9BQI7 771 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 SF3B5Q9BWJ5 86 aaKnown RBP12.15□□□□□ -0.46
VMP1-210ENST00000589823 DGCR6LQ9BY27 220 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 ZNF556Q9HAH1 456 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 GP6Q9HCN6 339 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 EMC3Q9P0I2 261 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 CLEC4AQ9UMR7 237 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 EMC9Q9Y3B6 208 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 MPDZO75970 2070 aa12.15□□□□□ -0.46
VMP1-210ENST00000589823 TRAV27A0A087WT01 109 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 A0A1W2PNV4 684 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 SAC3D1A6NKF1 404 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 HSPB2A8KAH6 182 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 C11orf98E9PRG8 122 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 KLF4O43474 513 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 RNF13O43567 381 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 RAMP1O60894 148 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 ADAP00813 363 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 CRHP06850 196 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 ANXA8P13928 327 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 POU2F1P14859 743 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 ANPEPP15144 967 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 ZNF43P17038 809 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 GSTM3P21266 225 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 PRKACGP22612 351 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 AHCYP23526 432 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 CEACAM8P31997 349 aaPredicted RBP12.14□□□□□ -0.47
VMP1-210ENST00000589823 GSSP48637 474 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 PRPS1P60891 318 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 ZP4Q12836 540 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 C1DQ13901 141 aaKnown RBP12.14□□□□□ -0.47
VMP1-210ENST00000589823 SLC17A1Q14916 467 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 POU4F3Q15319 338 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 HSPB2Q16082 182 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 TMEM201Q5SNT2 666 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 STK32CQ86UX6 486 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 UEVLDQ8IX04 471 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 HS3ST5Q8IZT8 346 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 KDM8Q8N371 416 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 MARVELD2Q8N4S9 558 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 OR9K2Q8NGE7 335 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 OR51A7Q8NH64 312 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 TNFRSF13CQ96RJ3 184 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 GPA33Q99795 319 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 DCLRE1BQ9H816 532 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 TAS2R5Q9NYW4 299 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 OAZ3Q9UMX2 235 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 SLC5A6Q9Y289 635 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 HIF3AQ9Y2N7 669 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 NOX1Q9Y5S8 564 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 ZNF462Q96JM2 2506 aa12.14□□□□□ -0.47
VMP1-210ENST00000589823 RP1L1Q8IWN7 2480 aaPredicted RBP12.14□□□□□ -0.47
VMP1-210ENST00000589823 IGKV3D-15A0A087WSY6 115 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 LOC102725191A0A1B0GVB3 256 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 ZNF716A6NP11 495 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 ZNF724A8MTY0 619 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 MS4A18H0YCH9 400 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 PYCARD-AS1I3L0S3 204 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 J3QKU1 62 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 SS18L1O75177 396 aaPredicted RBP12.13□□□□□ -0.47
VMP1-210ENST00000589823 TOXO94900 526 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 YES1P07947 543 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 PLA2G2AP14555 144 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 CTSSP25774 331 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 AQP2P41181 271 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 SLC16A1P53985 500 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 SIRPAP78324 504 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 RPL18Q07020 188 aaKnown RBP12.13□□□□□ -0.47
VMP1-210ENST00000589823 COX10Q12887 443 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 MS4A18Q3C1V0 323 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 ALG10Q5BKT4 473 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 EEF1A1P5Q5VTE0 462 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 NCCRP1Q6ZVX7 275 aaPredicted RBP12.13□□□□□ -0.47
VMP1-210ENST00000589823 FAM214BQ7L5A3 538 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 PXKQ7Z7A4 578 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 TUSC5Q8IXB3 177 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 CNEP1R1Q8N9A8 125 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 ANKK1Q8NFD2 765 aa12.13□□□□□ -0.47
VMP1-210ENST00000589823 DNAJC9Q8WXX5 260 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms