RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 FOXC2Q99958 501 aa7.3□□□□□ -1.24
DNMT1-219ENST00000589349 ZNF350Q9GZX5 532 aa7.3□□□□□ -1.24
DNMT1-219ENST00000589349 ARMC7Q9H6L4 198 aa7.3□□□□□ -1.24
DNMT1-219ENST00000589349 MTHFD2LQ9H903 347 aaPredicted RBP7.3□□□□□ -1.24
DNMT1-219ENST00000589349 CTPS2Q9NRF8 586 aa7.3□□□□□ -1.24
DNMT1-219ENST00000589349 POLE3Q9NRF9 147 aa7.3□□□□□ -1.24
DNMT1-219ENST00000589349 PLSCR4Q9NRQ2 329 aa7.3□□□□□ -1.24
DNMT1-219ENST00000589349 KLHL9Q9P2J3 617 aa7.3□□□□□ -1.24
DNMT1-219ENST00000589349 KLHL13Q9P2N7 655 aa7.3□□□□□ -1.24
DNMT1-219ENST00000589349 P2RX2Q9UBL9 471 aa7.3□□□□□ -1.24
DNMT1-219ENST00000589349 USH1CQ9Y6N9 552 aa7.3□□□□□ -1.24
DNMT1-219ENST00000589349 NUP214P35658 2090 aaPredicted RBP7.3□□□□□ -1.24
DNMT1-219ENST00000589349 MED12LQ86YW9 2145 aa7.3□□□□□ -1.24
DNMT1-219ENST00000589349 PCNX3Q9H6A9 2034 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 CIB4A0PJX0 185 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 CFAP73A6NFT4 308 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 NPIPB9F8W1W9 429 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 ANKRD28O15084 1053 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 EFNA2O43921 213 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 KIAA0513O60268 411 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 SNNO75324 88 aaPredicted RBP7.29□□□□□ -1.24
DNMT1-219ENST00000589349 KRT33AO76009 404 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 GOSR1O95249 250 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 CGAP01215 116 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 C1QCP02747 245 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 AMY1AP04745 511 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 DBIP07108 87 aaKnown RBP7.29□□□□□ -1.24
DNMT1-219ENST00000589349 CHRM4P08173 479 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 GKN3PP0CG01 181 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 ETFAP13804 333 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 CRYGSP22914 178 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 CXCR1P25024 350 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 PSMA4P25789 261 aaKnown RBP7.29□□□□□ -1.24
DNMT1-219ENST00000589349 APOBEC1P41238 236 aaKnown RBP7.29□□□□□ -1.24
DNMT1-219ENST00000589349 DIO1P49895 249 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 CHN2P52757 468 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 AQP5P55064 265 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 DSTNP60981 165 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 NKX6-1P78426 367 aaPredicted RBP7.29□□□□□ -1.24
DNMT1-219ENST00000589349 LARS2Q15031 903 aaKnown RBP7.29□□□□□ -1.24
DNMT1-219ENST00000589349 ACKR1Q16570 336 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 PDCD4Q53EL6 469 aaKnown RBP7.29□□□□□ -1.24
DNMT1-219ENST00000589349 SYT14P1Q58G82 188 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 BEX5Q5H9J7 111 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 AGBL2Q5U5Z8 902 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 IGFL4Q6B9Z1 124 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 HEPHL1Q6MZM0 1159 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 ZNF529Q6P280 563 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 SPNS3Q6ZMD2 512 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 FRRS1Q6ZNA5 592 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 GRINAQ7Z429 371 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 GALNT5Q7Z7M9 940 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 LRRC34Q8IZ02 419 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 OR9I1Q8NGQ6 314 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 OR52P1PQ8NH57 321 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 MIPOL1Q8TD10 442 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 CNOT9Q92600 299 aaKnown RBP7.29□□□□□ -1.24
DNMT1-219ENST00000589349 PIGTQ969N2 578 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 S100PBPQ96BU1 408 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 TLCD1Q96CP7 247 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 DDIT4LQ96D03 193 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 MUCL1Q96DR8 90 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 ADGRG7Q96K78 797 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 ATP6V1G3Q96LB4 118 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 TRNT1Q96Q11 434 aaKnown RBP7.29□□□□□ -1.24
DNMT1-219ENST00000589349 HDHD5Q9BXW7 423 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 KRTAP4-2Q9BYR5 136 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 OR11A1Q9GZK7 315 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 NGBQ9NPG2 151 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 TCF7L2Q9NQB0 619 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 ACER3Q9NUN7 267 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 INTS9Q9NV88 658 aaKnown RBP7.29□□□□□ -1.24
DNMT1-219ENST00000589349 CALML5Q9NZT1 146 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 EMC3Q9P0I2 261 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.29□□□□□ -1.24
DNMT1-219ENST00000589349 CHRNA9Q9UGM1 479 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 KCNE5Q9UJ90 142 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 HAO1Q9UJM8 370 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 SLC13A4Q9UKG4 626 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 GPR52Q9Y2T5 361 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 NOSIPQ9Y314 301 aaKnown RBP7.29□□□□□ -1.24
DNMT1-219ENST00000589349 POLQO75417 2590 aa7.29□□□□□ -1.24
DNMT1-219ENST00000589349 CCDC168Q8NDH2 2452 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 TMED7-TICAM2A0A0A6YYA0 188 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.28□□□□□ -1.24
DNMT1-219ENST00000589349 FAM234BA2RU67 622 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 AP3D1O14617 1153 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 BCAS1O75363 584 aaPredicted RBP7.28□□□□□ -1.24
DNMT1-219ENST00000589349 LYZL6O75951 148 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 CDH2P19022 906 aaPredicted RBP7.28□□□□□ -1.24
DNMT1-219ENST00000589349 GTF2E2P29084 291 aaKnown RBP7.28□□□□□ -1.24
DNMT1-219ENST00000589349 TACR3P29371 465 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 PGM1P36871 562 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 MAGEA8P43361 318 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 HTR3AP46098 478 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 POLR2HP52434 150 aaKnown RBP7.28□□□□□ -1.24
DNMT1-219ENST00000589349 CRISP3P54108 245 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 SLC18A1P54219 525 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 NR1H2P55055 460 aa7.28□□□□□ -1.24
DNMT1-219ENST00000589349 MXRA7P84157 204 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms