RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 ZCCHC18P0CG32 403 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 HNRNPCL4P0DMR1 293 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 ZNF43P17038 809 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 NCF2P19878 526 aaPredicted RBP12.12□□□□□ -0.47
VMP1-209ENST00000588915 CALCRP30988 508 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 CDKN2CP42773 168 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 EVX1P49640 407 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 ROR2Q01974 943 aaKnown RBP12.12□□□□□ -0.47
VMP1-209ENST00000588915 HGFACQ04756 655 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 BNIP2Q12982 314 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 COX20Q5RI15 118 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 VHLLQ6RSH7 139 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 C5orf46Q6UWT4 87 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 LINGO2Q7L985 606 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 VRK2Q86Y07 508 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 ZBTB18Q99592 522 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 SPATA9Q9BWV2 254 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 C12orf10Q9HB07 376 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 ZNF443Q9Y2A4 671 aaPredicted RBP12.12□□□□□ -0.47
VMP1-209ENST00000588915 GPR45Q9Y5Y3 372 aa12.12□□□□□ -0.47
VMP1-209ENST00000588915 A0A096LPE4 126 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 A0A0A6YYJ9 748 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 A0A1W2PPZ6 126 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 TMEM129A0AVI4 362 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 LRP5LA4QPB2 252 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 TMEM247A6NEH6 219 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 SLCO1B7G3V0H7 640 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 hCG_2039718K7EN88 272 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 RFXANKO14593 260 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 OR2T1O43869 369 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 SLC43A1O75387 559 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 IL6P05231 212 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 GSNP06396 782 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 IL12AP29459 219 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 THBS4P35443 961 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 MVDP53602 400 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 ARF1P84077 181 aaKnown RBP12.11□□□□□ -0.47
VMP1-209ENST00000588915 STX3Q13277 289 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 RIN1Q13671 783 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 NET1Q7Z628 596 aaPredicted RBP12.11□□□□□ -0.47
VMP1-209ENST00000588915 UBASH3BQ8TF42 649 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 SLC38A5Q8WUX1 472 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 OXGR1Q96P68 337 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 SOX7Q9BT81 388 aa12.11□□□□□ -0.47
VMP1-209ENST00000588915 CACYBPQ9HB71 228 aaKnown RBP12.11□□□□□ -0.47
VMP1-209ENST00000588915 IGHV2OR16-5A0A0B4J2B6 119 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 SDHDO14521 159 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 AKAP8O43823 692 aaKnown RBP12.1□□□□□ -0.47
VMP1-209ENST00000588915 PNMTP11086 282 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 SRP14P37108 136 aaKnown RBP12.1□□□□□ -0.47
VMP1-209ENST00000588915 DVL1P1P54792 670 aaPredicted RBP12.1□□□□□ -0.47
VMP1-209ENST00000588915 CDH15P55291 814 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 CLDN17P56750 224 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 DSTNP60981 165 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 TUBA1BP68363 451 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 TUBA4AP68366 448 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 SRSF2Q01130 221 aaKnown RBP12.1□□□□□ -0.47
VMP1-209ENST00000588915 LGALS3BPQ08380 585 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 ADRM1Q16186 407 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 DEF8Q6ZN54 512 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 MSANTD1Q6ZTZ1 278 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 TUBA1AQ71U36 451 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 SPATA21Q7Z572 469 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 MEX3DQ86XN8 651 aaKnown RBP12.1□□□□□ -0.47
VMP1-209ENST00000588915 CLIP4Q8N3C7 705 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 GPR137CQ8N3F9 429 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 PIK3C3Q8NEB9 887 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 PNPT1Q8TCS8 783 aaKnown RBP12.1□□□□□ -0.47
VMP1-209ENST00000588915 AENQ8WTP8 325 aaKnown RBP12.1□□□□□ -0.47
VMP1-209ENST00000588915 ZFAND2BQ8WV99 257 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 MS4A5Q9H3V2 200 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 TPT1P8Q9HAU6 139 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 GPR35Q9HC97 309 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 USP22Q9UPT9 525 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 CMAHPQ9Y471 501 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 CHST2Q9Y4C5 530 aa12.1□□□□□ -0.47
VMP1-209ENST00000588915 TRPC5OSA6NMA1 111 aa12.09□□□□□ -0.47
VMP1-209ENST00000588915 ZNF99A8MXY4 864 aaPredicted RBP12.09□□□□□ -0.47
VMP1-209ENST00000588915 AIM2O14862 343 aa12.09□□□□□ -0.47
VMP1-209ENST00000588915 RGS16O15492 202 aaPredicted RBP12.09□□□□□ -0.47
VMP1-209ENST00000588915 BCHEP06276 602 aa12.09□□□□□ -0.47
VMP1-209ENST00000588915 PRG2P13727 222 aa12.09□□□□□ -0.47
VMP1-209ENST00000588915 ETFAP13804 333 aa12.09□□□□□ -0.47
VMP1-209ENST00000588915 APEX1P27695 318 aaKnown RBP12.09□□□□□ -0.47
VMP1-209ENST00000588915 GTF2E2P29084 291 aaKnown RBP12.09□□□□□ -0.47
VMP1-209ENST00000588915 CRATP43155 626 aa12.09□□□□□ -0.47
VMP1-209ENST00000588915 NME5P56597 212 aa12.09□□□□□ -0.47
VMP1-209ENST00000588915 VSNL1P62760 191 aa12.09□□□□□ -0.47
VMP1-209ENST00000588915 EGR4Q05215 589 aa12.09□□□□□ -0.47
VMP1-209ENST00000588915 DAG1Q14118 895 aa12.09□□□□□ -0.47
VMP1-209ENST00000588915 FAM69AQ5T7M9 428 aa12.09□□□□□ -0.47
VMP1-209ENST00000588915 C6orf89Q6UWU4 347 aa12.09□□□□□ -0.47
VMP1-209ENST00000588915 SERPINA11Q86U17 422 aa12.09□□□□□ -0.47
VMP1-209ENST00000588915 SVOPLQ8N434 492 aa12.09□□□□□ -0.47
VMP1-209ENST00000588915 CKAP2Q8WWK9 683 aa12.09□□□□□ -0.47
VMP1-209ENST00000588915 SLC25A36Q96CQ1 311 aa12.09□□□□□ -0.47
VMP1-209ENST00000588915 LRR1Q96L50 414 aa12.09□□□□□ -0.47
VMP1-209ENST00000588915 PTDSS2Q9BVG9 487 aa12.09□□□□□ -0.47
VMP1-209ENST00000588915 DENND2DQ9H6A0 471 aaPredicted RBP12.09□□□□□ -0.47
VMP1-209ENST00000588915 RMND5AQ9H871 391 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms