RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 YY1AP1Q9H869 796 aa13.81□□□□□ -0.2
GHDC-209ENST00000588762 KRCC1Q9NPI7 259 aaPredicted RBP13.81□□□□□ -0.2
GHDC-209ENST00000588762 PLSCR4Q9NRQ2 329 aa13.81□□□□□ -0.2
GHDC-209ENST00000588762 ZNF229Q9UJW7 825 aa13.81□□□□□ -0.2
GHDC-209ENST00000588762 TMCC3Q9ULS5 477 aa13.81□□□□□ -0.2
GHDC-209ENST00000588762 NOSIPQ9Y314 301 aaKnown RBP13.81□□□□□ -0.2
GHDC-209ENST00000588762 KLF2Q9Y5W3 355 aaPredicted RBP13.81□□□□□ -0.2
GHDC-209ENST00000588762 SPTAN1Q13813 2472 aaKnown RBP13.81□□□□□ -0.2
GHDC-209ENST00000588762 FREM1Q5H8C1 2179 aa13.81□□□□□ -0.2
GHDC-209ENST00000588762 A1L4Q6 167 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 PIP5K1CO60331 668 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 KRT36O76013 467 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 FUT1P19526 365 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 FUT4P22083 530 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 ERFP50548 548 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 P2RY4P51582 365 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 C1DQ13901 141 aaKnown RBP13.8□□□□□ -0.2
GHDC-209ENST00000588762 NUFIP2Q7Z417 695 aaKnown RBP13.8□□□□□ -0.2
GHDC-209ENST00000588762 NANOGNBQ7Z5D8 188 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 LUZP2Q86TE4 346 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 NRMQ8IXM6 262 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 OR5J2Q8NH18 312 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 OXGR1Q96P68 337 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 RAB3IPQ96QF0 476 aaPredicted RBP13.8□□□□□ -0.2
GHDC-209ENST00000588762 CHID1Q9BWS9 393 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 C20orf141Q9NUB4 165 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 PARPBPQ9NWS1 579 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 SEC14L4Q9UDX3 406 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 ING1Q9UK53 422 aaPredicted RBP13.8□□□□□ -0.2
GHDC-209ENST00000588762 TMEM5Q9Y2B1 443 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 FLVCR1Q9Y5Y0 555 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 COL12A1Q99715 3063 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 ICE1Q9Y2F5 2266 aa13.8□□□□□ -0.2
GHDC-209ENST00000588762 UTP20O75691 2785 aaKnown RBP13.8□□□□□ -0.2
GHDC-209ENST00000588762 USP9YO00507 2555 aaPredicted RBP13.79□□□□□ -0.2
GHDC-209ENST00000588762 TRBV4-1A0A0J9YWV2 114 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 LOC102725191A0A1B0GVB3 256 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 PRSS44E7EML9 344 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 PLPP3O14495 311 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 CGAP01215 116 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 ADORA3P0DMS8 318 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 SAGP10523 405 aaPredicted RBP13.79□□□□□ -0.2
GHDC-209ENST00000588762 ZNF43P17038 809 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 PRKCDQ05655 676 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 PUDPQ08623 228 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 POU4F3Q15319 338 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 OR2T5Q6IEZ7 315 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 TBPL2Q6SJ96 375 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 SLC46A3Q7Z3Q1 461 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 ZNF100Q8IYN0 542 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 LRRC17Q8N6Y2 441 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 ZNF610Q8N9Z0 462 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 OR2T29Q8NH02 315 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 UTP4Q969X6 686 aaKnown RBP13.79□□□□□ -0.2
GHDC-209ENST00000588762 ALPK1Q96QP1 1244 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 RBM24Q9BX46 236 aaKnown RBP13.79□□□□□ -0.2
GHDC-209ENST00000588762 OPN3Q9H1Y3 402 aaPredicted RBP13.79□□□□□ -0.2
GHDC-209ENST00000588762 JKAMPQ9P055 326 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 FOXD3Q9UJU5 478 aaPredicted RBP13.79□□□□□ -0.2
GHDC-209ENST00000588762 NOX1Q9Y5S8 564 aa13.79□□□□□ -0.2
GHDC-209ENST00000588762 SH3PXD2BA1X283 911 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 A8MXE2 369 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 EFCAB9A8MZ26 197 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 MS4A18H0YCH9 400 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 TNFRSF11BO00300 401 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 GNGT2O14610 69 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 MRPL33O75394 65 aaKnown RBP13.78□□□□□ -0.2
GHDC-209ENST00000588762 CLDN1O95832 211 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 CST1P01037 141 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 ASAH2BP0C7U1 165 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 AHCYP23526 432 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 MS4A18Q3C1V0 323 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 FBXL19-AS1Q494R0 122 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 CASP12Q6UXS9 341 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 CREB3L2Q70SY1 520 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 UEVLDQ8IX04 471 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 KDM8Q8N371 416 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 OR4K5Q8NGD3 323 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 LIPHQ8WWY8 451 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 RNASE6Q93091 150 aaKnown RBP13.78□□□□□ -0.2
GHDC-209ENST00000588762 APH1AQ96BI3 265 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 PSMG3-AS1Q96PY0 264 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 REEP1Q9H902 201 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 FANCFQ9NPI8 374 aa13.78□□□□□ -0.2
GHDC-209ENST00000588762 CCM2LQ9NUG4 571 aaPredicted RBP13.78□□□□□ -0.2
GHDC-209ENST00000588762 C11orf98E9PRG8 122 aa13.77□□□□□ -0.21
GHDC-209ENST00000588762 BLOC1S5-TXNDC5H3BN57 136 aa13.77□□□□□ -0.21
GHDC-209ENST00000588762 RNF13O43567 381 aa13.77□□□□□ -0.21
GHDC-209ENST00000588762 AKAP8O43823 692 aaKnown RBP13.77□□□□□ -0.21
GHDC-209ENST00000588762 FKBP6O75344 327 aa13.77□□□□□ -0.21
GHDC-209ENST00000588762 MAKP20794 623 aa13.77□□□□□ -0.21
GHDC-209ENST00000588762 UQCRC1P31930 480 aa13.77□□□□□ -0.21
GHDC-209ENST00000588762 IFNGR2P38484 337 aa13.77□□□□□ -0.21
GHDC-209ENST00000588762 GPR4P46093 362 aa13.77□□□□□ -0.21
GHDC-209ENST00000588762 OR3A2P47893 321 aa13.77□□□□□ -0.21
GHDC-209ENST00000588762 HMGA2P52926 109 aa13.77□□□□□ -0.21
GHDC-209ENST00000588762 LSM11P83369 360 aaKnown RBP eCLIP13.77□□□□□ -0.21
GHDC-209ENST00000588762 ZP4Q12836 540 aa13.77□□□□□ -0.21
GHDC-209ENST00000588762 CCNIQ14094 377 aa13.77□□□□□ -0.21
GHDC-209ENST00000588762 SEC23BQ15437 767 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms