RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 LRRC58Q96CX6 371 aa17.17■□□□□ 0.34
TPM4-208ENST00000588410 TRMT61AQ96FX7 289 aaKnown RBP17.17■□□□□ 0.34
TPM4-208ENST00000588410 ZNF587Q96SQ5 575 aaPredicted RBP17.17■□□□□ 0.34
TPM4-208ENST00000588410 ARHGDIGQ99819 225 aa17.17■□□□□ 0.34
TPM4-208ENST00000588410 ECSITQ9BQ95 431 aa17.17■□□□□ 0.34
TPM4-208ENST00000588410 BDH2Q9BUT1 245 aa17.17■□□□□ 0.34
TPM4-208ENST00000588410 ALG2Q9H553 416 aa17.17■□□□□ 0.34
TPM4-208ENST00000588410 NANOGQ9H9S0 305 aa17.17■□□□□ 0.34
TPM4-208ENST00000588410 MED4Q9NPJ6 270 aa17.17■□□□□ 0.34
TPM4-208ENST00000588410 SAR1AQ9NR31 198 aa17.17■□□□□ 0.34
TPM4-208ENST00000588410 ZNF701Q9NV72 531 aaPredicted RBP17.17■□□□□ 0.34
TPM4-208ENST00000588410 KLHL14Q9P2G3 628 aa17.17■□□□□ 0.34
TPM4-208ENST00000588410 ITPR3Q14573 2671 aa17.17■□□□□ 0.34
TPM4-208ENST00000588410 SHISA9B4DS77 424 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 NPPAP01160 153 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 SOD3P08294 240 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 INHBBP09529 407 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 CD40P25942 277 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 C1QTNF12Q5T7M4 302 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 REP15Q6BDI9 236 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 CGB2Q6NT52 195 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 ZNF613Q6PF04 617 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 BIVMQ86UB2 503 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 SNX32Q86XE0 403 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 WDR31Q8NA23 367 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 PCYOX1LQ8NBM8 494 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 OR8J3Q8NGG0 315 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 OR6S1Q8NH40 331 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 VANGL1Q8TAA9 524 aaPredicted RBP17.16■□□□□ 0.34
TPM4-208ENST00000588410 RASSF5Q8WWW0 418 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 WFDC6Q9BQY6 131 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 ASPNQ9BXN1 380 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 GSX1Q9H4S2 264 aaPredicted RBP17.16■□□□□ 0.34
TPM4-208ENST00000588410 SEC14L4Q9UDX3 406 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 RCE1Q9Y256 329 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 CORINQ9Y5Q5 1042 aa17.16■□□□□ 0.34
TPM4-208ENST00000588410 LOC100653049A0A140TA62 436 aa17.15■□□□□ 0.34
TPM4-208ENST00000588410 AKAP8O43823 692 aaKnown RBP17.15■□□□□ 0.34
TPM4-208ENST00000588410 TPST2O60704 377 aa17.15■□□□□ 0.34
TPM4-208ENST00000588410 SLC43A1O75387 559 aa17.15■□□□□ 0.34
TPM4-208ENST00000588410 KRT34O76011 436 aa17.15■□□□□ 0.34
TPM4-208ENST00000588410 DANCRP0C864 163 aa17.15■□□□□ 0.34
TPM4-208ENST00000588410 RABL3Q5HYI8 236 aa17.15■□□□□ 0.34
TPM4-208ENST00000588410 HMBOX1Q6NT76 420 aa17.15■□□□□ 0.34
TPM4-208ENST00000588410 GPR32P1Q8NGA4 272 aa17.15■□□□□ 0.34
TPM4-208ENST00000588410 ALKBH3Q96Q83 286 aaPredicted RBP17.15■□□□□ 0.34
TPM4-208ENST00000588410 CCDC134Q9H6E4 229 aa17.15■□□□□ 0.34
TPM4-208ENST00000588410 GID8Q9NWU2 228 aa17.15■□□□□ 0.34
TPM4-208ENST00000588410 CAPN7Q9Y6W3 813 aa17.15■□□□□ 0.34
TPM4-208ENST00000588410 CPSF4LA6NMK7 179 aaKnown RBP17.14■□□□□ 0.33
TPM4-208ENST00000588410 H7C1Q1 480 aa17.14■□□□□ 0.33
TPM4-208ENST00000588410 FZD7O75084 574 aa17.14■□□□□ 0.33
TPM4-208ENST00000588410 UPK3AO75631 287 aa17.14■□□□□ 0.33
TPM4-208ENST00000588410 PTNP21246 168 aa17.14■□□□□ 0.33
TPM4-208ENST00000588410 GZMMP51124 257 aa17.14■□□□□ 0.33
TPM4-208ENST00000588410 UBE2NP61088 152 aaKnown RBP17.14■□□□□ 0.33
TPM4-208ENST00000588410 LGALS3BPQ08380 585 aa17.14■□□□□ 0.33
TPM4-208ENST00000588410 PMS2P3Q13401 168 aa17.14■□□□□ 0.33
TPM4-208ENST00000588410 NRF1Q16656 503 aa17.14■□□□□ 0.33
TPM4-208ENST00000588410 HIKESHIQ53FT3 197 aa17.14■□□□□ 0.33
TPM4-208ENST00000588410 ENTPD8Q5MY95 495 aa17.14■□□□□ 0.33
TPM4-208ENST00000588410 UEVLDQ8IX04 471 aa17.14■□□□□ 0.33
TPM4-208ENST00000588410 GPR137CQ8N3F9 429 aa17.14■□□□□ 0.33
TPM4-208ENST00000588410 ADPRHL1Q8NDY3 354 aa17.14■□□□□ 0.33
TPM4-208ENST00000588410 OR6T1Q8NGN1 323 aa17.14■□□□□ 0.33
TPM4-208ENST00000588410 PROX1Q92786 737 aa17.14■□□□□ 0.33
TPM4-208ENST00000588410 TAMM41Q96BW9 452 aa17.14■□□□□ 0.33
TPM4-208ENST00000588410 TMEM43Q9BTV4 400 aa17.14■□□□□ 0.33
TPM4-208ENST00000588410 LINC00470Q9BZP3 86 aa17.14■□□□□ 0.33
TPM4-208ENST00000588410 OBP2BQ9NPH6 170 aa17.14■□□□□ 0.33
TPM4-208ENST00000588410 LOC102725191A0A1B0GVB3 256 aa17.13■□□□□ 0.33
TPM4-208ENST00000588410 CHP2O43745 196 aa17.13■□□□□ 0.33
TPM4-208ENST00000588410 BGLAPP02818 100 aa17.13■□□□□ 0.33
TPM4-208ENST00000588410 CD247P20963 164 aa17.13■□□□□ 0.33
TPM4-208ENST00000588410 MDH1P40925 334 aaKnown RBP17.13■□□□□ 0.33
TPM4-208ENST00000588410 SLC25A3Q00325 362 aa17.13■□□□□ 0.33
TPM4-208ENST00000588410 ROR2Q01974 943 aaKnown RBP17.13■□□□□ 0.33
TPM4-208ENST00000588410 PGGHGQ32M88 737 aa17.13■□□□□ 0.33
TPM4-208ENST00000588410 AGAP6Q5VW22 663 aa17.13■□□□□ 0.33
TPM4-208ENST00000588410 ERICH5Q6P6B1 374 aa17.13■□□□□ 0.33
TPM4-208ENST00000588410 CCDC80Q76M96 950 aa17.13■□□□□ 0.33
TPM4-208ENST00000588410 SCAIQ8N9R8 606 aa17.13■□□□□ 0.33
TPM4-208ENST00000588410 OR1K1Q8NGR3 316 aa17.13■□□□□ 0.33
TPM4-208ENST00000588410 FKRPQ9H9S5 495 aa17.13■□□□□ 0.33
TPM4-208ENST00000588410 B3GAT1Q9P2W7 334 aa17.13■□□□□ 0.33
TPM4-208ENST00000588410 TRIM64A6NGJ6 449 aa17.12■□□□□ 0.33
TPM4-208ENST00000588410 TRIM64BA6NI03 449 aa17.12■□□□□ 0.33
TPM4-208ENST00000588410 FAM171A2A8MVW0 826 aa17.12■□□□□ 0.33
TPM4-208ENST00000588410 OVOL3O00110 214 aa17.12■□□□□ 0.33
TPM4-208ENST00000588410 FXYD1O00168 92 aa17.12■□□□□ 0.33
TPM4-208ENST00000588410 SMAD7O15105 426 aaKnown RBP17.12■□□□□ 0.33
TPM4-208ENST00000588410 SLC22A2O15244 555 aa17.12■□□□□ 0.33
TPM4-208ENST00000588410 IFNA14P01570 189 aa17.12■□□□□ 0.33
TPM4-208ENST00000588410 PAX7P23759 505 aa17.12■□□□□ 0.33
TPM4-208ENST00000588410 CDKN1AP38936 164 aa17.12■□□□□ 0.33
TPM4-208ENST00000588410 SH3BGRP55822 239 aaPredicted RBP17.12■□□□□ 0.33
TPM4-208ENST00000588410 SPOCK1Q08629 439 aa17.12■□□□□ 0.33
TPM4-208ENST00000588410 NPTX1Q15818 432 aa17.12■□□□□ 0.33
TPM4-208ENST00000588410 TBRG1Q3YBR2 411 aa17.12■□□□□ 0.33
TPM4-208ENST00000588410 TTC33Q6PID6 262 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms