RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 ZNF311Q5JNZ3 666 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 CEP85LQ5SZL2 805 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 RNF220Q5VTB9 566 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 MREGQ8N565 214 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 GLB1L3Q8NCI6 653 aaPredicted RBP12.29□□□□□ -0.44
ERCC1-205ENST00000587888 MFSD8Q8NHS3 518 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 STK35Q8TDR2 534 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 KTI12Q96EK9 354 aaPredicted RBP12.29□□□□□ -0.44
ERCC1-205ENST00000587888 TMEM19Q96HH6 336 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 SOX7Q9BT81 388 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 LINC00470Q9BZP3 86 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 BPESC1Q9GZL8 116 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 PLK3Q9H4B4 646 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 ARMC7Q9H6L4 198 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 MYOZ1Q9NP98 299 aaPredicted RBP12.29□□□□□ -0.44
ERCC1-205ENST00000587888 CRNNQ9UBG3 495 aaPredicted RBP12.29□□□□□ -0.44
ERCC1-205ENST00000587888 PRDM4Q9UKN5 801 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 DSPPQ9NZW4 1301 aa12.29□□□□□ -0.44
ERCC1-205ENST00000587888 A0A096LPI6 279 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 VSTM5A8MXK1 200 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 TMEM229AB2RXF0 380 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 hCG_2039718K7EN88 272 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 HDAC3O15379 428 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 NPIPB7O75200 414 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 STAMBPO95630 424 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 PNMTP11086 282 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 HOXB1P14653 301 aaPredicted RBP12.28□□□□□ -0.44
ERCC1-205ENST00000587888 DAOP14920 347 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 CBR1P16152 277 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 ZNF23P17027 643 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 CBLP22681 906 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 PAX7P23759 505 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 GTF2E2P29084 291 aaKnown RBP12.28□□□□□ -0.44
ERCC1-205ENST00000587888 IDH3GP51553 393 aaPredicted RBP12.28□□□□□ -0.44
ERCC1-205ENST00000587888 IL1RL1Q01638 556 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 C1DQ13901 141 aaKnown RBP12.28□□□□□ -0.44
ERCC1-205ENST00000587888 EFNB3Q15768 340 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 ZSWIM7Q19AV6 140 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 C6orf10Q5SRN2 563 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 SPATA21Q7Z572 469 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 MYPOPQ86VE0 399 aaPredicted RBP12.28□□□□□ -0.44
ERCC1-205ENST00000587888 SVOPLQ8N434 492 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 ZNF540Q8NDQ6 660 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 OR4F15Q8NGB8 312 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 MAGEE2Q8TD90 523 aaPredicted RBP12.28□□□□□ -0.44
ERCC1-205ENST00000587888 MGARPQ8TDB4 240 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 PTDSS2Q9BVG9 487 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 PARD6BQ9BYG5 372 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 NELFAQ9H3P2 528 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 RMND5AQ9H871 391 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 GPR35Q9HC97 309 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 THAP1Q9NVV9 213 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 RPS6KB2Q9UBS0 482 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 SEC14L4Q9UDX3 406 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 IFT52Q9Y366 437 aa12.28□□□□□ -0.44
ERCC1-205ENST00000587888 FTCDNL1E5RQL4 147 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 SLC43A1O75387 559 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 PDE5AO76074 875 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 IGLV1-44P01699 117 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 ERCC1P07992 297 aaPredicted RBP12.27□□□□□ -0.45
ERCC1-205ENST00000587888 NUDT7P0C024 238 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 ZCCHC18P0CG32 403 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 IDO1P14902 403 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 NPR2P20594 1047 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 CAPZA2P47755 286 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 PPOXP50336 477 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 EGR4Q05215 589 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 NPRL3Q12980 569 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 CR1LQ2VPA4 569 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 CEACAM16Q2WEN9 425 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 C3orf36Q3SXR2 165 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 PDCD4Q53EL6 469 aaKnown RBP12.27□□□□□ -0.45
ERCC1-205ENST00000587888 GPR137CQ8N3F9 429 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 MAL2Q969L2 176 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 TAAR8Q969N4 342 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 VPS33AQ96AX1 596 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 ZNF837Q96EG3 531 aaPredicted RBP12.27□□□□□ -0.45
ERCC1-205ENST00000587888 ITCHQ96J02 903 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 OXGR1Q96P68 337 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 DOK1Q99704 481 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 CRLF2Q9HC73 371 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 MALRD1Q5VYJ5 2156 aa12.27□□□□□ -0.45
ERCC1-205ENST00000587888 ANK3Q12955 4377 aaKnown RBP12.27□□□□□ -0.45
ERCC1-205ENST00000587888 TMEM129A0AVI4 362 aa12.26□□□□□ -0.45
ERCC1-205ENST00000587888 RPL36A-HNRNPH2H7BZ11 118 aa12.26□□□□□ -0.45
ERCC1-205ENST00000587888 HAX1O00165 279 aa12.26□□□□□ -0.45
ERCC1-205ENST00000587888 SEC14L2O76054 403 aa12.26□□□□□ -0.45
ERCC1-205ENST00000587888 ZNF432O94892 652 aa12.26□□□□□ -0.45
ERCC1-205ENST00000587888 IGKV3-15P01624 115 aa12.26□□□□□ -0.45
ERCC1-205ENST00000587888 POLR2JP52435 117 aaKnown RBP12.26□□□□□ -0.45
ERCC1-205ENST00000587888 SH3BGRP55822 239 aaPredicted RBP12.26□□□□□ -0.45
ERCC1-205ENST00000587888 WDR4P57081 412 aaKnown RBP12.26□□□□□ -0.45
ERCC1-205ENST00000587888 SQLEQ14534 574 aa12.26□□□□□ -0.45
ERCC1-205ENST00000587888 SLC9B1Q4ZJI4 515 aa12.26□□□□□ -0.45
ERCC1-205ENST00000587888 TNFAIP8L3Q5GJ75 292 aa12.26□□□□□ -0.45
ERCC1-205ENST00000587888 CARD17Q5XLA6 110 aa12.26□□□□□ -0.45
ERCC1-205ENST00000587888 NUP37Q8NFH4 326 aa12.26□□□□□ -0.45
ERCC1-205ENST00000587888 RNF217Q8TC41 542 aa12.26□□□□□ -0.45
ERCC1-205ENST00000587888 NEU4Q8WWR8 484 aaPredicted RBP12.26□□□□□ -0.45
ERCC1-205ENST00000587888 ANKRD27Q96NW4 1050 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms