RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 SPDL1Q96EA4 605 aa16.37■□□□□ 0.21
TRIM47-205ENST00000587774 SLC38A2Q96QD8 506 aa16.37■□□□□ 0.21
TRIM47-205ENST00000587774 LINC00470Q9BZP3 86 aa16.37■□□□□ 0.21
TRIM47-205ENST00000587774 VAPAQ9P0L0 249 aa16.37■□□□□ 0.21
TRIM47-205ENST00000587774 B3GAT1Q9P2W7 334 aa16.37■□□□□ 0.21
TRIM47-205ENST00000587774 RPS6KB2Q9UBS0 482 aa16.37■□□□□ 0.21
TRIM47-205ENST00000587774 STAB1Q9NY15 2570 aa16.37■□□□□ 0.21
TRIM47-205ENST00000587774 TRBV5-3A0A0A0MS03 114 aa16.36■□□□□ 0.21
TRIM47-205ENST00000587774 A0A1B0GWA3 101 aa16.36■□□□□ 0.21
TRIM47-205ENST00000587774 OR6C65A6NJZ3 312 aa16.36■□□□□ 0.21
TRIM47-205ENST00000587774 TGDSO95455 350 aa16.36■□□□□ 0.21
TRIM47-205ENST00000587774 BMP4P12644 408 aa16.36■□□□□ 0.21
TRIM47-205ENST00000587774 CLDN17P56750 224 aa16.36■□□□□ 0.21
TRIM47-205ENST00000587774 UBE2NP61088 152 aaKnown RBP16.36■□□□□ 0.21
TRIM47-205ENST00000587774 ROR2Q01974 943 aaKnown RBP16.36■□□□□ 0.21
TRIM47-205ENST00000587774 CHRNB3Q05901 458 aa16.36■□□□□ 0.21
TRIM47-205ENST00000587774 TMEM249Q2WGJ8 235 aa16.36■□□□□ 0.21
TRIM47-205ENST00000587774 GLIPR1L2Q4G1C9 344 aa16.36■□□□□ 0.21
TRIM47-205ENST00000587774 PAGE3Q5JUK9 113 aa16.36■□□□□ 0.21
TRIM47-205ENST00000587774 C6orf52Q5T4I8 152 aa16.36■□□□□ 0.21
TRIM47-205ENST00000587774 CXXC5Q7LFL8 322 aaKnown RBP16.36■□□□□ 0.21
TRIM47-205ENST00000587774 LSMEM1Q8N8F7 131 aa16.36■□□□□ 0.21
TRIM47-205ENST00000587774 FAM168AQ92567 244 aa16.36■□□□□ 0.21
TRIM47-205ENST00000587774 BCL2L2Q92843 193 aaPredicted RBP16.36■□□□□ 0.21
TRIM47-205ENST00000587774 FBXO17Q96EF6 278 aa16.36■□□□□ 0.21
TRIM47-205ENST00000587774 KATNB1Q9BVA0 655 aa16.36■□□□□ 0.21
TRIM47-205ENST00000587774 IKZF5Q9H5V7 419 aa16.36■□□□□ 0.21
TRIM47-205ENST00000587774 C12orf10Q9HB07 376 aa16.36■□□□□ 0.21
TRIM47-205ENST00000587774 SLC52A3Q9NQ40 469 aa16.36■□□□□ 0.21
TRIM47-205ENST00000587774 RCE1Q9Y256 329 aa16.36■□□□□ 0.21
TRIM47-205ENST00000587774 IGKV1D-42A0A075B6H8 117 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 A0A096LPE4 126 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 ARPC4-TTLL3A0A0A6YYG9 625 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 A0A1W2PPZ6 126 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 A8MV72 311 aaPredicted RBP16.35■□□□□ 0.21
TRIM47-205ENST00000587774 M0R082 166 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 TPST1O60507 370 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 ZNF432O94892 652 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 SLC25A16P16260 332 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 ZNF43P17038 809 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 EFNA4P52798 201 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 SH3BGRP55822 239 aaPredicted RBP16.35■□□□□ 0.21
TRIM47-205ENST00000587774 CDK6Q00534 326 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 SWI5Q1ZZU3 235 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 MST1LQ2TV78 715 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 ALG10BQ5I7T1 473 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 FAM69AQ5T7M9 428 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 HMBOX1Q6NT76 420 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 REEP3Q6NUK4 255 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 HIPK1Q86Z02 1210 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 ZNF417Q8TAU3 575 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 C10orf105Q8TEF2 133 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 NANOS1Q8WY41 292 aaKnown RBP16.35■□□□□ 0.21
TRIM47-205ENST00000587774 SLC38A4Q969I6 547 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 TAAR8Q969N4 342 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 TNFRSF13CQ96RJ3 184 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 ZNF587Q96SQ5 575 aaPredicted RBP16.35■□□□□ 0.21
TRIM47-205ENST00000587774 PRR14Q9BWN1 585 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 SEC61A2Q9H9S3 476 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 CA10Q9NS85 328 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 CRNNQ9UBG3 495 aaPredicted RBP16.35■□□□□ 0.21
TRIM47-205ENST00000587774 PMF1-BGLAPU3KQ54 211 aa16.35■□□□□ 0.21
TRIM47-205ENST00000587774 AIM2O14862 343 aa16.34■□□□□ 0.21
TRIM47-205ENST00000587774 CECR9P0C854 216 aa16.34■□□□□ 0.21
TRIM47-205ENST00000587774 PPIBP23284 216 aaKnown RBP16.34■□□□□ 0.21
TRIM47-205ENST00000587774 AQP5P55064 265 aa16.34■□□□□ 0.21
TRIM47-205ENST00000587774 LOXL1Q08397 574 aaPredicted RBP16.34■□□□□ 0.21
TRIM47-205ENST00000587774 ANKRD16Q6P6B7 361 aa16.34■□□□□ 0.21
TRIM47-205ENST00000587774 DHRS4L2Q6PKH6 230 aa16.34■□□□□ 0.21
TRIM47-205ENST00000587774 MYPOPQ86VE0 399 aaPredicted RBP16.34■□□□□ 0.21
TRIM47-205ENST00000587774 KRT73Q86Y46 540 aa16.34■□□□□ 0.21
TRIM47-205ENST00000587774 MAGEE2Q8TD90 523 aaPredicted RBP16.34■□□□□ 0.21
TRIM47-205ENST00000587774 OXGR1Q96P68 337 aa16.34■□□□□ 0.21
TRIM47-205ENST00000587774 SORCS2Q96PQ0 1159 aa16.34■□□□□ 0.21
TRIM47-205ENST00000587774 ZNF317Q96PQ6 595 aaPredicted RBP16.34■□□□□ 0.21
TRIM47-205ENST00000587774 KCNS3Q9BQ31 491 aa16.34■□□□□ 0.21
TRIM47-205ENST00000587774 CCDC28BQ9BUN5 200 aa16.34■□□□□ 0.21
TRIM47-205ENST00000587774 KLHL14Q9P2G3 628 aa16.34■□□□□ 0.21
TRIM47-205ENST00000587774 TESQ9UGI8 421 aaKnown RBP16.34■□□□□ 0.21
TRIM47-205ENST00000587774 GMEB1Q9Y692 573 aa16.34■□□□□ 0.21
TRIM47-205ENST00000587774 TRAF3IP2O43734 574 aaPredicted RBP16.33■□□□□ 0.2
TRIM47-205ENST00000587774 OR2T1O43869 369 aa16.33■□□□□ 0.2
TRIM47-205ENST00000587774 IGLV1-44P01699 117 aa16.33■□□□□ 0.2
TRIM47-205ENST00000587774 CRYAAP02489 173 aa16.33■□□□□ 0.2
TRIM47-205ENST00000587774 CSF3P09919 207 aa16.33■□□□□ 0.2
TRIM47-205ENST00000587774 CBLP22681 906 aa16.33■□□□□ 0.2
TRIM47-205ENST00000587774 AQP1P29972 269 aa16.33■□□□□ 0.2
TRIM47-205ENST00000587774 GRPRP30550 384 aa16.33■□□□□ 0.2
TRIM47-205ENST00000587774 NCALDP61601 193 aa16.33■□□□□ 0.2
TRIM47-205ENST00000587774 SNRPD2P62316 118 aaKnown RBP16.33■□□□□ 0.2
TRIM47-205ENST00000587774 VLDLRP98155 873 aa16.33■□□□□ 0.2
TRIM47-205ENST00000587774 NAAAQ02083 359 aa16.33■□□□□ 0.2
TRIM47-205ENST00000587774 SCARB2Q14108 478 aa16.33■□□□□ 0.2
TRIM47-205ENST00000587774 C5orf46Q6UWT4 87 aa16.33■□□□□ 0.2
TRIM47-205ENST00000587774 DNAJA4Q8WW22 397 aaPredicted RBP16.33■□□□□ 0.2
TRIM47-205ENST00000587774 SPATA5L1Q9BVQ7 753 aa16.33■□□□□ 0.2
TRIM47-205ENST00000587774 TMEM38AQ9H6F2 299 aa16.33■□□□□ 0.2
TRIM47-205ENST00000587774 TRAV36DV7A0A075B6V5 113 aa16.32■□□□□ 0.2
TRIM47-205ENST00000587774 ZNF503-AS2A6NEH8 195 aa16.32■□□□□ 0.2
TRIM47-205ENST00000587774 RPL36A-HNRNPH2H7BZ11 118 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms