RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 TMEM158Q8WZ71 300 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 PROX1Q92786 737 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 ITCHQ96J02 903 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 KCNS3Q9BQ31 491 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 SOX7Q9BT81 388 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 PAIP1Q9H074 479 aaKnown RBP13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 SDR39U1Q9NRG7 319 aaPredicted RBP13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 CALML5Q9NZT1 146 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 ZIM2Q9NZV7 527 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 B3GAT1Q9P2W7 334 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 RAB21Q9UL25 225 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 PCDHB14Q9Y5E9 798 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 FKBP7Q9Y680 259 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 M0R082 166 aa13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 LMX1BO60663 402 aa13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 CRYAAP02489 173 aa13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 CSF3P09919 207 aa13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 HOXB9P17482 250 aaPredicted RBP13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 IDH3GP51553 393 aaPredicted RBP13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 ARF1P84077 181 aaKnown RBP13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 HGFACQ04756 655 aa13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 GLIPR1L2Q4G1C9 344 aa13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 ZNF417Q8TAU3 575 aa13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 GTF2H4Q92759 462 aa13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 MSI2Q96DH6 328 aaKnown RBP13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 ZNF587Q96SQ5 575 aaPredicted RBP13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 PIMREGQ9BSJ6 248 aa13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 KATNB1Q9BVA0 655 aa13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 BPESC1Q9GZL8 116 aa13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 SHARPINQ9H0F6 387 aa13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 RMND5AQ9H871 391 aa13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 ZNF232Q9UNY5 417 aa13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 RASD1Q9Y272 281 aa13.19□□□□□ -0.3
PRKCSH-204ENST00000587290 IGKV1D-42A0A075B6H8 117 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 ARPC4-TTLL3A0A0A6YYG9 625 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 A0A0G2JPF8 293 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 LOC100289279A0A1B0GTE1 492 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 LRP5LA4QPB2 252 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 HNRNPCL2B2RXH8 293 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 HNRNPCL3B7ZW38 293 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 UBDO15205 165 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 HNRNPCL1O60812 293 aaKnown RBP13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 ZNF432O94892 652 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 VAMP5O95183 116 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 IGLV1-44P01699 117 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 HNRNPCL4P0DMR1 293 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 APEHP13798 732 aaKnown RBP13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 MAGOHP61326 146 aaKnown RBP13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 IL1RL1Q01638 556 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 NPRL3Q12980 569 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 RGNQ15493 299 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 PHYHD1Q5SRE7 291 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 CARD17Q5XLA6 110 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 WDFY1Q8IWB7 410 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 MSRB3Q8IXL7 192 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 MIER2Q8N344 545 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 MFSD8Q8NHS3 518 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 NFKBIDQ8NI38 313 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 STK35Q8TDR2 534 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 TAAR8Q969N4 342 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 BOD1Q96IK1 185 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 CACYBPQ9HB71 228 aaKnown RBP13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 OBP2BQ9NPH6 170 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 SLC25A37Q9NYZ2 338 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 SLAMF8Q9P0V8 285 aa13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 CRNNQ9UBG3 495 aaPredicted RBP13.18□□□□□ -0.3
PRKCSH-204ENST00000587290 A0A096LPI6 279 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 A0A1B0GWA3 101 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 SH3PXD2BA1X283 911 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 CLIC1O00299 241 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 TPST1O60507 370 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 HPRP00739 348 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 ZNF43P17038 809 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 GTF2E2P29084 291 aaKnown RBP13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 GRPRP30550 384 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 IL2RGP31785 369 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 THBS4P35443 961 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 GZMKP49863 264 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 CEACAM16Q2WEN9 425 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 FAM120AOSQ5T036 256 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 SVOPLQ8N434 492 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 WFDC6Q9BQY6 131 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 LINC00470Q9BZP3 86 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 PIF1Q9H611 641 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 NOX3Q9HBY0 568 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 CRLF2Q9HC73 371 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 GPR35Q9HC97 309 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 A4GALTQ9NPC4 353 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 KCNS2Q9ULS6 477 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 IFT52Q9Y366 437 aa13.17□□□□□ -0.3
PRKCSH-204ENST00000587290 IGHV2OR16-5A0A0B4J2B6 119 aa13.16□□□□□ -0.3
PRKCSH-204ENST00000587290 TMEM247A6NEH6 219 aa13.16□□□□□ -0.3
PRKCSH-204ENST00000587290 B9A039 149 aa13.16□□□□□ -0.3
PRKCSH-204ENST00000587290 LRRN3E7EW58 273 aa13.16□□□□□ -0.3
PRKCSH-204ENST00000587290 SLCO1B7G3V0H7 640 aa13.16□□□□□ -0.3
PRKCSH-204ENST00000587290 hCG_2039718K7EN88 272 aa13.16□□□□□ -0.3
PRKCSH-204ENST00000587290 TRAF3IP2O43734 574 aaPredicted RBP13.16□□□□□ -0.3
PRKCSH-204ENST00000587290 SLC43A1O75387 559 aa13.16□□□□□ -0.3
PRKCSH-204ENST00000587290 IGKV3-15P01624 115 aa13.16□□□□□ -0.3
PRKCSH-204ENST00000587290 IGFBP1P08833 259 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms